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Table 1 Results of Illumina sequencing and assembly

From: Genome resequencing and bioinformatic analysis of SNP containing candidate genes in the autoimmune vitiligo Smyth line chicken model

Line

Reads numbers

Total # of reads used for alignment

Total # of reads not aligned

Coverage

Total # of SNP

BL (P) 1

62,764,368

50,536,831

9,480,794

5.1x

4,846,132

SL2

88,525,266

69,886,110

14,225,577

7.0x

5,465,994

  1. 1(P) means the parental line, no vitiligo.
  2. 2 SL, with vitiligo.