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Table 2 Pairwise comparison of Salmonella Enteritidis genomes based on the number of single nucleotide polymorphic loci

From: High resolution assembly and characterization of genomes of Canadian isolates of Salmonella Enteritidis

 

SE 1

SE 2

SE 3

SE 4

SE 5

SE 6

SE 7

SE 8

SE 9

SE 10

SE 11

P125109

622

609

610

622

625

631

594

614

859

601

596

SE1

 

217

222

126

123

132

243

81

898

257

242

SE2

  

29

219

214

224

221

213

863

216

201

SE 3

   

234

221

225

224

211

864

217

202

SE 4

    

23

82

268

112

905

247

248

SE 5

     

75

261

111

894

252

237

SE 6

      

256

112

867

245

230

SE 7

       

248

866

49

38

SE 8

        

870

225

222

SE 9

         

857

840

SE 10

          

27

  1. Loci showing single nucleotide changes in high resolution genomes of Canadian field isolates of Salmonella Enteritidis found using SNPsfinder software (http://snpsfinder.lanl.gov/) by comparison to the genome of the reference strain P125109 phage type 4.
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BMC Genomics

ISSN: 1471-2164

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