Skip to main content

Table 2 Pairwise comparison of Salmonella Enteritidis genomes based on the number of single nucleotide polymorphic loci

From: High resolution assembly and characterization of genomes of Canadian isolates of Salmonella Enteritidis

  SE 1 SE 2 SE 3 SE 4 SE 5 SE 6 SE 7 SE 8 SE 9 SE 10 SE 11
P125109 622 609 610 622 625 631 594 614 859 601 596
SE1   217 222 126 123 132 243 81 898 257 242
SE2    29 219 214 224 221 213 863 216 201
SE 3     234 221 225 224 211 864 217 202
SE 4      23 82 268 112 905 247 248
SE 5       75 261 111 894 252 237
SE 6        256 112 867 245 230
SE 7         248 866 49 38
SE 8          870 225 222
SE 9           857 840
SE 10            27
  1. Loci showing single nucleotide changes in high resolution genomes of Canadian field isolates of Salmonella Enteritidis found using SNPsfinder software (http://snpsfinder.lanl.gov/) by comparison to the genome of the reference strain P125109 phage type 4.
\