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Table 2 Overall performance for CNA detection of each method in terms of mean / median values

From: Inferring copy number and genotype in tumour exome data

Method ADTEx ExomeCNV VarScan 2 Control-FREEC Method [[12]]
Sensitivity 92.5% / 94.1% 92.3% / 94.2% 91.9% / 93.2% 75.5% / 89.8% 86.9% / 88.3%
Specificity 98.5% / 99.5% 95.1% / 97.5% 96.3% / 98.0% 90.3% / 99.8% 93.8% / 99.6%
Precision 91.9% / 96.8% 68.2% / 75.8% 76.4% / 80.2% 78.7% / 94.6% 84.6% / 92.9%
Accuracy 97.9% / 99.3% 95.3% / 96.4% 96.0% / 97.2% 90.1% / 99.2% 94.5% / 98.9%
F-Measure 91.5% / 92.3% 76.5% / 90.6% 82.0% / 84.7% 76.0% / 82.5% 85.2% / 87.8%
  1. In the table, bold value in each line represents the best value of each performance measure.