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Table 2 Length distribution of the transcripts and unigenes clustered from the de novo assembly

From: Comprehensive analysis of differentially expressed genes and transcriptional regulation induced by salt stress in two contrasting cotton genotypes

Category Transcript Unigene
All (> = 200 bp) 415,429 143,080
> = 500 bp 273,632 56,929
> = 1000 bp 181,131 30,038
N50 1,747 1,239
N90 497 277
Total length 236,414,577 53,791,217
Max length 14,995 14,995
Min length 201 201
Average length 1111.61 707.9
  1. Note: The N50 size is computed by sorting all transcripts from largest to smallest and by determining the minimum set of transcripts whose sizes total 50% of the entire transcript and unigene was the same; N90 was counted in the similar way.