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Table 2 Genotype accuracy results of MEI detection using Tangram and RetroSeq on simulated data for Alus

From: Tangram: a comprehensive toolbox for mobile element insertion detection

   Tangram RetroSeq
Read length Coverage Het Homo Total Het Homo Total
76 bp 99.3% 90.8% 97.6% 2.3% 92.8% 20.4%
10× 100.0% 94.2% 98.8% 40.6% 63.6% 45.2%
20× 100.0% 98.4% 99.7% 96.5% 8.8% 78.9%
106 bp 96.6% 93.4% 96.0% 0.0% 91.6% 18.3%
10× 99.6% 92.6% 98.2% 38.8% 64.4% 43.9%
20× 100.0% 95.6% 99.1% 95.1% 10.8% 19.6%