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Table 4 Genes emerging from association analysis with climatic variables

From: Targeting environmental adaptation in the monocot model Brachypodium distachyon: a multi-faceted approach

Chromosome

Position

ID

PC

Position

1

2493094

Bradi1g02575

1

genic

  

Bradi1g03700

1

genic

1

69649973

Bradi1g71690

1

genic

1

69649974

Bradi1g71690

1

genic

1

70771534

Bradi1g73170

1

genic

2

38837316

Bradi2g38560

1

genic

3

29941038

Bradi3g28560

1

genic

3

44083155

Bradi3g42530

1,3

5 kb upstream

  

Bradi3g42540

1,3

5 kb upstream

  

Bradi3g42550

1,3

5 kb upstream

  

Bradi3g42560

1,3

5 kb upstream

3

56650876

Bradi3g56950

1

genic

4

3872705

Bradi4g04690

2

5 kb upstream

  

Bradi4g04710

2

5 kb upstream

5

1006046

Bradi5g01110

1

5 kb upstream

  

Bradi5g01120

1

5 kb upstream

  1. EASs confidently detected (p-value < 1.37 × 10−4) by both the association methods. The chromosome, EAS position in bp, gene ID and environmental variable involved (PC 1 to 3) are given. Each gene was identified by either an internal EAS (genic) or an EAS 5 kb upstream (5 kb upstream). Genes from B. distachyon annotation V1.2.
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BMC Genomics

ISSN: 1471-2164

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