Table 4 Typical differentially expressed genes between the two groups
From: Dysregulation of genome-wide gene expression and DNA methylation in abnormal cloned piglets
GeneID | Normal cloned group RPKM | Abnormal cloned group RPKM | log2 Ratio Abnormal cloned group/ Normal cloned group) | Up/down | P-value | FDR | Symbol |
|---|---|---|---|---|---|---|---|
100153442 | 0.90 | 65.62 | 6.18 | Upa | 3.21E-06 | 1.85E-05 | SMPDL3A |
396959 | 19.59 | 1046.76 | 5.74 | Up | 0 | 0 | CARP |
100134978 | 26.22 | 716.11 | 4.77 | Up | 3.44E-13 | 4.79E-12 | XIRP1 |
733657 | 7.21 | 104.97 | 3.86 | Up | 1.80E-14 | 3.64E-13 | FBXO32 |
100048931 | 5.67 | 72.65 | 3.68 | Up | 4.11E-14 | 7.71E-13 | HSPH1 |
100511413 | 6.76 | 82.51 | 3.61 | Up | 2.10E-09 | 1.74E-08 | LOC100511413 |
100525306 | 5.17 | 62.44 | 3.59 | Up | 6.08E-14 | 1.10E-12 | LOC100525306 |
100286778 | 50.97 | 603.85 | 3.57 | Up | 7.68E-13 | 9.81E-12 | PDK4 |
100518997 | 105.39 | 1063.03 | 3.33 | Up | 3.04E-11 | 3.05E-10 | FLNC |
100337687 | 53.22 | 526.62 | 3.31 | Up | 1.87E-13 | 2.90E-12 | CSRP3 |
100156435 | 4728.49 | 522.52 | -3.18 | Downb | 0 | 0 | TNNC1 |
100515755 | 3844.93 | 467.28 | -3.04 | Down | 0 | 0 | LOC100515755 |
396690 | 7552.69 | 929.15 | -3.02 | Down | 0 | 0 | MLC2V |
414388 | 1128.10 | 184.48 | -2.61 | Down | 0 | 0 | TPM3 |
100513365 | 53.99 | 12.16 | -2.15 | Down | 5.16E-16 | 1.10E-14 | MGST2 |