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Table 6 Significance levels of TF and TC Families in different millet tissues

From: Maize and millet transcription factors annotated using comparative genomic and transcriptomic data

Family Leaf Root Stem Tassel
AP2 0.99945 0.76718 0.98899 0.56275
ARF 0.01159 0.06865 0.01158 0
AUX/IAA 0.47105 0.03618 0.03614 0.00532
B3 0.99396 0.95681 0.99811 0.95669
C2H2 0.89246 0.96644 0.82544 0.99639
C3H 0.00137 0 0.00137 0.00137
CAMTA 0 0 0 0
CPP 0 0.31277 0 0
DBB 0 0 0.25758 0.25749
Dof 0.77736 0.9161 0.77722 0.26481
E2F/DP 0 0 0.25758 0
ERF 0.81309 0.38687 0.97696 0.99993
FAR1 0 0 0 0
G2-like 0.14324 0.59204 0.00409 0.01937
GATA 0 0.6566 0.01406 0.08018
GRAS 0.21535 0.54695 0.70613 0.8295
GeBP 0 0.39791 0.11863 0.11857
HB-other 0 0.25768 0 0
HD-ZIP 0.64978 0.31871 0.31847 0.07824
HMG 0.51145 0.17489 0.17481 0
HSF 0.69426 0 0.09377 0.25772
LBD 1 0.87495 0.99906 0.99983
M-type 0.95506 0.34874 0.98958 0.34845
MBD 0.17489 0.17489 0.17481 0
MIKC 0.73159 0.99674 0.99908 0.93195
MYB 1 0.83698 0.99173 0.97335
MYB_related 0.02464 0.48928 0.0246 0.06101
NAC 0.98971 0.04414 0.79086 0.99741
NF-YA 0 0 0.2122 0.21211
NF-YB 0.17489 0.17489 0 0.17473
NF-YC 0 0.69635 0.11863 0.69607
Nin-like 0.1187 0.1187 0.39777 0.88753
OFP 1 1 0.99653 0.61825
SBP 0.40284 0.83409 0.03707 0
Sigma54_activat 0 0 0 0
TALE 0.98772 0.06865 0.06859 0.06852
TCP 0.73579 0.89168 0.73563 0
Trihelix 0.36847 0.0586 0.00954 0.05848
WRKY 0.96298 0.00631 0.96289 1
YABBY 0.89056 0.99982 0.89049 0
ZF-HD 0.89056 0.97861 0.25758 0.25749
bHLH 0.99999 0.99964 0.99472 0.95644
bZIP 0.07649 0.01792 0.07635 0.01784
mTERF 0.00206 0.76309 0.00205 0.00205
BED 0 0 0 0.31257
TAZ 0.31277 0 0.31267 0.71374
  1. Significance levels are based on P-values reported by Fisher’s exact test, a lower significance level means that larger amount of genes in a family are expressed in a tissue group. A P-value lower than 0.05 is regarded as significant.