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Table 2 HLA ambiguities between SBT and MIT-NGS HLA genotyping methods

From: High-throughput multiplex HLA genotyping by next-generation sequencing using multi-locus individual tagging

Locus

SBT

Alleles in G group*

MIT-NGS

A

23:01:01G

7

23:17 (2)

B

40:01:01G

17

40:01:02 (7)

 

07:05:01G

2

07:06 (3)

 

35:01:01G

18

35:01:23 (2)

C

07:01:01G

13

07:06 (8), 07:18 (4), 07:01:02 (1)

 

03:02:01G

10

03:02:02 (7)

 

12:02:01G

3

12:02:02 (7)

 

04:01:01G

20

04:82 (1)

 

15:05:01G

4

15:05:02 (1)

DRB1

14:01:01G

2

14:54 (6)

 

11:06:01G

2

11:129 (1)

  1. The number of individuals with this allele is shown in parentheses.
  2. *Number of ambiguous alleles defined by the G group (IMGT/HLA release 3.16.0).
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BMC Genomics

ISSN: 1471-2164

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