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Table 1 GO analysis for the top 2000 mouse and rat dendritic expressed genes

From: Divergence of RNA localization between rat and mouse neurons reveals the potential for rapid brain evolution

(A) GO analysis for the top 2000 mouse dendritic expressed genes
Category GO_Term GO_Description FDR
Biological process GO:0009987 Cellular process 4.5E-26
  GO:0044237 Cellular metabolic process 4.8E-10
  GO:0006412 Translation 1.1E-06
  GO:0051179 Localization 5.3E-06
  GO:0006091 Generation of precursor metabolites and energy 1.9E-05
  GO:0007399 Nervous system development 1.7E-04
  GO:0022900 Electron transport chain 8.5E-04
  GO:0006810 Transport 1.1E-03
  GO:0019538 Protein metabolic process 2.1E-02
  GO:0006119 Oxidative phosphorylation 3.7E-02
  GO:0022008 Neurogenesis 4.0E-02
Cellular component GO:0005840 Ribosome 5.3E-09
  GO:0030529 Ribonucleoprotein complex 1.8E-07
  GO:0043227 Membrane-bounded organelle 1.8E-07
  GO:0043228 Non-membrane-bounded organelle 2.5E-07
  GO:0043232 Intracellular non-membrane-bounded organelle 2.5E-07
  GO:0070469 Respiratory chain 7.7E-07
  GO:0031966 Mitochondrial membrane 8.3E-07
  GO:0005740 Mitochondrial envelope 4.4E-06
  GO:0019866 Organelle inner membrane 6.2E-06
  GO:0005743 Mitochondrial inner membrane 6.3E-06
  GO:0031090 Organelle membrane 2.6E-05
  GO:0031967 Organelle envelope 2.6E-05
  GO:0044429 Mitochondrial part 3.1E-05
  GO:0005856 Cytoskeleton 4.3E-04
Molecular function GO:0005198 Structural molecule activity 1.5E-07
  GO:0005515 Protein binding 3.8E-06
  GO:0015077 Monovalent inorganic cation transmembrane transporter activity 5.2E-02
  GO:0003954 NADH dehydrogenase activity 7.4E-02
  GO:0008137 NADH dehydrogenase (ubiquinone) activity 7.4E-02
  GO:0050136 NADH dehydrogenase (quinone) activity 7.4E-02
  GO:0015078 Hydrogen ion transmembrane transporter activity 7.8E-02
(B) GO analysis for the top 2000 rat dendritic expressed genes
Category GO_Term GO_Description FDR
Biological process GO:0009987 Cellular process 5.84E-31
  GO:0006414 Translational elongation 1.13E-04
  GO:0007399 Nervous system development 1.76E-04
  GO:0034621 Cellular macromolecular complex subunit organization 2.50E-04
  GO:0022008 Neurogenesis 1.22E-03
  GO:0034622 Cellular macromolecular complex assembly 3.06E-03
  GO:0051179 Localization 1.12E-08
  GO:0006810 Transport 2.09E-07
  GO:0001568 Blood vessel development 3.56E-03
  GO:0048514 Blood vessel morphogenesis 6.73E-03
Cellular component GO:0043234 Protein complex 4.38E-06
  GO:0031090 Organelle membrane 1.59E-05
  GO:0043005 Neuron projection 8.96E-05
  GO:0005740 Mitochondrial envelope 1.19E-04
  GO:0031966 Mitochondrial membrane 1.28E-04
  GO:0044445 Cytosolic part 1.83E-04
  GO:0022626 Cytosolic ribosome 4.25E-04
  GO:0022627 Cytosolic small ribosomal subunit 8.11E-04
  GO:0044429 Mitochondrial part 2.95E-03
  GO:0015935 Small ribosomal subunit 5.33E-03
  GO:0019866 Organelle inner membrane 1.68E-02
  GO:0070469 Respiratory chain 2.09E-02
  GO:0005743 Mitochondrial inner membrane 3.53E-02
  GO:0043228 Non-membrane-bounded organelle 4.89E-02
  GO:0043232 Intracellular non-membrane-bounded organelle 4.89E-02
Molecular function GO:0005515 Protein binding 9.71E-25
  GO:0005516 Calmodulin binding 2.09E-02
  GO:0015078 Hydrogen ion transmembrane transporter activity 3.35E-02
  GO:0015077 Monovalent inorganic cation transmembrane transporter activity 7.52E-02
  1. GO analysis for the top2000 ranked dendritic genes in mouse (A) and rat (B) with FDR < 0.1 used as threshold value.
  2. GO categories in "bold" correspond to categories found commonly in rat and mouse.