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Table 3 Primers of quantitative reverse transcription-polymerase chain reaction for validation of the digital gene expression data

From: RNA-Seq derived identification of differential transcription in the chrysanthemum leaf following inoculation with Alternaria tenuissima

Gene ID

Primer F (5′-3′)

Primer R (5′-3′)

Basic annotation

Unigene6575_All

CGGAATCAAGAAAGGTGCAT

ATTCATCCATCGTAGCCTGC

MYB family transcription factor

Unigene16113_All

CGTTGTGACGAGAGGAGTGA

CTTCTTCGGATGGGAATTGA

MYB family transcription factor

CL9570

AAAATGCTGGATTGCTGAGG

AAGACCATTTGTTGCCAAGG

MYB family transcription factor

Unigene29332_All

CAATTTCATTACCGAGGCGT

TGCCTAGCCATCTTCGAGTT

Ethylene-responsive transcription factor

Unigene17395_All

ACGAGATCCCAACAAAGGTG

TTGGACCCTTTGAAACGAAG

Ethylene-responsive transcription factor

Unigene271_All

CTCTAACTCCGTGCCTCGTC

TTAGAGGGGTTAGGAGGCGT

Ethylene-responsive transcription factor

Unigene7360_All

CACCTCGTGGTAGTGGGAGT

TGACTGCCATTATCGGTCAA

WRKY family transcription factor

Unigene12209_All

GTGGCTGAGATTGGTGGTTT

GCCTTTACAAGCGTTTCAGC

WRKY family transcription factor

Unigene37863_All

GGATCATCTCAGGGGGATTT

GACAACAGCATCACCACCAC

WRKY family transcription factor

Unigene37669_All

TAGATGCACATACCGCAAGG

TTTTCAGGCAAAGGTGGTTC

WRKY family transcription factor

Unigene23051_All

ACCTACAAACATCGGCTTCG

CTTCGAAAATGGTGCCCTAA

NAC transcription factor

Unigene4479_All

CAGCCAAAAATACCCTGCAT

ACGGACGAAAAACTGATTGG

NAC transcription factor

CL14412

AGTGTCCCTTCACCACCTTCG

CCGTTTCTCGTGACCCTGTT

NAC transcription factor

Unigene41060_All

GTAATCTGGAGCATGGGTGG

CTTAATGGTGTGCCCGTTTC

GRAS family transcription factor

Unigene20543_All

CTTGTTGCGAAACTGAGCTG

GACCCCTGCTGAAAAGATGA

GRAS family transcription factor

Unigene11471_All

TCGAGGGGAAGGAAACACTA

GGTTCTTCACAAGCCGACAT

GRAS family transcription factor

Unigene11800_All

AAATGTTTCGGTTTTCGACG

GATCTTTGTTAGGTGCCGGA

JAZ gene

Unigene3689_All

CATTGATGTAACAAACGGCG

AACCAACGCTTCTACACGCT

MYC2 transcription factor

CL10952

CCATTGACCCAAGCAACTTT

TTGAATACGGCTCCTCCATC

Vegetative storage protein

Unigene23699_All

CAAAGCATTGGATTGTGACG

TCTAAGATTGACATCCGCCC

NPR1 gene

Unigene52251_All

CCGGCTTTGATTGAACTGAT

CGTGGTTTCGTGGGTAGAGT

TGA transcription factor

CL11209

GCCGTATAATCGCTCTCACC

CCGGTGAGGTTTGTCAGTTT

Polygalacturonase-inhibiting protein

Unigene9160_All

TGAACACAACCAAGATGGGA

CCTCCACCTTGTCCACTGTT

Polyphenol oxidase