Figure 3

Correlation between high diversity simulations and known protein domain content. Correlation plots of Pfam-A annotations of each processed data set compared to known domain content for a) high diversity 454 simulated data set and b) high diversity Illumina simulated data set. Top row, left to right: all reads unprocessed; clustered reads; assembly - contigs only. Bottom row, left to right: assembly – debris only; assembly – contigs and debris combined; clustered assembly. Pearson correlation coefficient shown in top left corner.