Skip to main content

Table 3 Overview of the currently completely determined Acholeplasmataceae genomes

From: Complete genome determination and analysis of Acholeplasma oculi strain 19L, highlighting the loss of basic genetic features in the Acholeplasmataceae

Genus

Acholeplasma

‘Candidatus Phytoplasma’

Species

oculi

laidlawii

brassicae

palmae

mali

australiense

asteris

Strain

19L

PG-8

0502

J233

AT

rp-A

NZSb11

OY-M

AY-WB

Chromosome organization

circular

circular

circular

circular

linear

circular

circular

circular

circular

Size [bp]

1,587,120

1,496,992

1,877,792

1,554,229

601,943

879,959

959,779

853,092

706,569

G + C [%]

31.29

31.93

35.77

29,98

21.39

27.42

27.19

27.76

26.89

CDS

         

Number (pseudogenes)

1,471

1,380

1,704 (14)

1,441 (2)

497 (15)

839 (155)

1100

752

671

G + C [%]1

31.49

32.23

36.15

29.20

22.60

28.72

28.47

29.09

28.54

Average length1

992

984

1,003

979

957

825

674

829

776

Coding percentage1 [%]

92.0

90.7

90.3

90.6

76.6

64.1

77.3

73.1

73.7

rRNA

         

Number

6

6

14

6

6

6

6

6

6

G + C [%]

49.27

48.57

49.31

48.64

44.32

46.37

46.61

45.95

46.14

tRNA

         

Number

34

34

45

35

32

35

35

32

31

G + C [%]

56.87

56.97

56.12

56.56

52.41

54.11

54.11

53.61

53.6

plasmdis

         

Number

-

-

-

-

-

1

1

2

4

 

LK

CP

FO

FO

CU

AM

CP

AP

CP

Acc. no.

028559

000896

681348

681347

469464

422018

002548

006628

000061

 

this study

[8]

[7]

[7]

[13]

[9]

[10]

[11]

[12]

  1. Bold letters highlight results obtained in this study. 1excluding pseudogenes.
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us