Genus | Acholeplasma | ‘Candidatus Phytoplasma’ | |||||||
---|---|---|---|---|---|---|---|---|---|
Species | oculi | laidlawii | brassicae | palmae | mali | australiense | asteris | ||
Strain | 19L | PG-8 | 0502 | J233 | AT | rp-A | NZSb11 | OY-M | AY-WB |
Chromosome organization | circular | circular | circular | circular | linear | circular | circular | circular | circular |
Size [bp] | 1,587,120 | 1,496,992 | 1,877,792 | 1,554,229 | 601,943 | 879,959 | 959,779 | 853,092 | 706,569 |
G + C [%] | 31.29 | 31.93 | 35.77 | 29,98 | 21.39 | 27.42 | 27.19 | 27.76 | 26.89 |
CDS | |||||||||
Number (pseudogenes) | 1,471 | 1,380 | 1,704 (14) | 1,441 (2) | 497 (15) | 839 (155) | 1100 | 752 | 671 |
G + C [%]1 | 31.49 | 32.23 | 36.15 | 29.20 | 22.60 | 28.72 | 28.47 | 29.09 | 28.54 |
Average length1 | 992 | 984 | 1,003 | 979 | 957 | 825 | 674 | 829 | 776 |
Coding percentage1 [%] | 92.0 | 90.7 | 90.3 | 90.6 | 76.6 | 64.1 | 77.3 | 73.1 | 73.7 |
rRNA | |||||||||
Number | 6 | 6 | 14 | 6 | 6 | 6 | 6 | 6 | 6 |
G + C [%] | 49.27 | 48.57 | 49.31 | 48.64 | 44.32 | 46.37 | 46.61 | 45.95 | 46.14 |
tRNA | |||||||||
Number | 34 | 34 | 45 | 35 | 32 | 35 | 35 | 32 | 31 |
G + C [%] | 56.87 | 56.97 | 56.12 | 56.56 | 52.41 | 54.11 | 54.11 | 53.61 | 53.6 |
plasmdis | |||||||||
Number | - | - | - | - | - | 1 | 1 | 2 | 4 |
LK | CP | FO | FO | CU | AM | CP | AP | CP | |
Acc. no. | 028559 | 000896 | 681348 | 681347 | 469464 | 422018 | 002548 | 006628 | 000061 |
this study | [8] | [7] | [7] | [13] | [9] | [10] | [11] | [12] |