From: Microsatellite abundance across the Anthozoa and Hydrozoa in the phylum Cnidaria
Species | Symbiodinium present | Total sequences | Mean raw sequence length (bp) | Sequences with msats | % Sequences with msats | % Sequences with msats (after bootstrapped mean) | Bootstrapped mean of total msat | Bca CI (95%) | Total msat (count/Mbp) |
---|---|---|---|---|---|---|---|---|---|
E. flexuosa s | Y | 128422 | 452.9 | 1686 | 1.3 | 0.01 | 14.2 | (7.13, 19.54) | 85.3 |
A. fenestrafer s | Y | 132680 | 430.4 | 2169 | 1.6 | 0.01 | 17.2 | (9.52, 28.43) | 103.1 |
M. alcicornis f | Y | 114916 | 550.6 | 2081 | 1.8 | 0.02 | 19.5 | (10.07, 43.78) | 117.1 |
Mean | Â | 125339 | 478 | 1979+ | 1.6# | 0.01 | 16.9^ | Â | Â |
L. glaberrima s | N | 132680 | 418.9 | 10177 | 7.7 | 0.08 | 104.6 | (58.30, 148.30) | 627.9 |
Tanacetipathes sp s | N | 117973 | 470.2 | 6544 | 5.6 | 0.05 | 60.6 | (31.25, 91.05) | 363.7 |
Plumarella sp s | N | 108495 | 500.1 | 4594 | 4.2 | 0.05 | 51.3 | (28.06, 71.87) | 307.6 |
C. californica s | N | 100639 | 462.4 | 1797 | 1.8 | 0.02 | 17.6 | (10.91, 24.65) | 105.7 |
M. senile s | N | 109046 | 505.4 | 7519 | 6.9 | 0.08 | 88.6 | (28.19, 176.72) | 531.7 |
Mean | Â | 113767 | 471.4 | 6126 | 5.2 | 0.06 | 64.6 | Â | Â |
N. vectensis* s | Y | 59149 | Â | 3418 | 5.8 | 0.29 | 173.8 | (98.60, 265.90) | 1042.9 |
H. magnipapillata* f | Y | 126667 | Â | 5438 | 4.3 | 0.22 | 277.7 | (63.60, 868.30) | 1666.1 |
A. digitifera* s | Y | 29765 | Â | 225 | 0.8 | 0.68 | 201.8 | (99.60, 446.30) | 1210.7 |
Mean | Â | 71860 | Â | 3027 | 3.6 | 0.40 | 217.8 | Â | 1306.6 |
Symbiodinium | Â | Â | Â | Â | Â | Â | Â | Â | Â |
     Clade C |  | 82331 |  | 12174 |  |  |  |  | 565.2 |
     A3 |  | 94810 |  | 2674 |  |  |  |  | 154.9 |
     B1 |  | 33816 |  | 19426 |  |  |  |  | 326.5 |
Mean | Â | 70319 | Â | 11424 | Â | Â | Â | Â | 348.9 |