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Table 1 Categorization of reads of small RNAs in pear fruit at various developmental stages DAF: days after flowering

From: Identification of miRNAs involved in pear fruit development and quality

Category Development stages Average
15DAF 36 DAF 81 DAF 110 DAF 145 DAF 167 DAF
Total reads 22,354,861 23,934,357 19,030,925 25,576,773 23,934,213 24,527,030 23,226,360
Clean reads 21,612,084 23,153,525 18,618,514 25,086,346 23,575,395 24,263,969 22,718,306
Exon_antisense 319,460 308,465 218,280 257,309 215,078 220,482 256,512
Exon_sense 509,150 453,742 341,272 398,473 365,311 350,102 403,008
Intron_antisense 377,104 395,221 298,440 378,094 331,083 360,635 356,763
Intron_sense 797,178 619,168 528,500 614,109 662,064 599,612 636,772
Known miRNAs 1,147,166 1,014,459 1,271,600 1,590,575 1,170,540 1,113,401 1,217,957
rRNA etc.* 1,158,744 756,242 617,356 708,315 607,519 635,925 747,350
Repeat 9,514,359 10,881,244 8,544,263 11,564,973 11,161,868 11,351,321 10,503,005
Un-annotated 7,788,923 8,724,984 6,798,803 9,574,498 9,061,932 9,632,491 8,596,939
  1. *rRNA/snRNA/snoRNA/tRNA considered.