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Table 3 MiRNAs and target genes involved in lignification and sugar and acid pathways

From: Identification of miRNAs involved in pear fruit development and quality

miRNA name Target gene ID Target gene description Pathway
miR397a Pbr003857.1 Laccase Metabolic pathways(0.7902142)
Pbr012358.1 Metabolic pathways(0.7902142)
Pbr012395.1 Metabolic pathways(0.7902142)
Pbr012398.1 Metabolic pathways(0.7902142)
Pbr013101.1 Metabolic pathways(0.7902142)
Pbr014332.1 Metabolic pathways(0.7902142)
Pbr018935.1 Metabolic pathways(0.7902142)
Pbr022393.1 Metabolic pathways(0.7902142)
Pbr022396.1 Metabolic pathways(0.7902142)
Pbr023439.1 Metabolic pathways(0.7902142)
Pbr023443.1 Metabolic pathways(0.7902142)
Pbr027989.1 Metabolic pathways(0.7902142)
Pbr028392.1 Metabolic pathways(0.7902142)
Pbr029302.1 Metabolic pathways(0.7902142)
Pbr029309.1 Metabolic pathways(0.7902142)
Pbr033893.1 Metabolic pathways(0.7902142)
Pbr033951.1 Metabolic pathways(0.7902142)
Pbr034945.1 Metabolic pathways(0.7902142)
Pbr034948.1 Metabolic pathways(0.7902142)
Pbr035745.1 Metabolic pathways(0.7902142)
Pbr035929.1 Metabolic pathways(0.7902142)
Pbr035962.1 Metabolic pathways(0.7902142)
Pbr038866.1 Metabolic pathways(0.7902142)
Pbr038988.1 Metabolic pathways(0.7902142)
Pbr041372.1 Metabolic pathways(0.7902142)
Pbr041924.1 Metabolic pathways(0.7902142)
Pbr042315.1 Metabolic pathways(0.7902142)
miR1132 Pbr031785.3 Malate_PEPCK_PEPCK-ATP  
miR1318 Pbr015038.1 Citrate_ACL_ACLY Metabolic pathways(0.7902142),Microbial metabolism in diverse environments(0.9297261),Biosynthesis of secondary metabolites(0.9498542),Citrate cycle (TCA cycle)(0.997454)
miR2635 Pbr038213.1 Malate_PEPC_PEPC Carbon fixation in photosynthetic organisms(0.7361554),Metabolic pathways(0.7902142),Methane metabolism(0.9082858),Pyruvate metabolism(0.9296067),Microbial metabolism in diverse environments(0.9297261),Carbon fixation pathways in prokaryotes(0.9871138)
miR394a Pbr020930.1 Malate_MalT  
Pbr023085.1 Malate_MalT  
miR396b Pbr006726.1 DNA_G6PDH_G6PDH Metabolic pathways(0.7902142),Microbial metabolism in diverse environments(0.9297261),Biosynthesis of secondary metabolites(0.9498542),Pentose phosphate pathway(0.975254),Glutathione metabolism(0.9974516)
Pbr010337.1 Malate_MalT  
Pbr016769.1 Malate_MalT  
Pbr016770.1 Malate_MalT  
miR5077 Pbr023965.1 Sugar_HT  
Pbr032130.1 Sugar_HT Meiosis - yeast(0.9924183)
Pbr033292.1 Sugar_HT  
miR5500 Pbr029752.1 Sugar_HK_HK Galactose metabolism(0.2583273),Butirosin and neomycin biosynthesis(0.4998806),Streptomycin biosynthesis(0.5326464),Amino sugar and nucleotide sugar metabolism(0.6427769),Fructose and mannose metabolism(0.6615606),Metabolic pathways(0.7902142),Insulin signaling pathway(0.878923),Carbohydrate digestion and absorption(0.919634),Microbial metabolism in diverse environments(0.9297261),Biosynthesis of secondary metabolites(0.9498542),Starch and sucrose metabolism(0.9606751),Glycolysis / Gluconeogenesis(0.9894463),Type II diabetes mellitus(0.9906034)
miR825* Pbr016798.1 Sugar_ALD-ALD1 Phenylalanine, tyrosine and tryptophan biosynthesis(1.488743e-06),Sulfur metabolism(0.04454147),Fructose and mannose metabolism(0.6615606),Carbon fixation in photosynthetic organisms(0.7361554),Metabolic pathways(0.7902142),Cysteine and methionine metabolism(0.9034785),Microbial metabolism in diverse environments(0.9297261),Biosynthesis of secondary metabolites(0.9498542),Pentose phosphate pathway(0.975254),Glycolysis / Gluconeogenesis(0.9894463)
miR952b Pbr012392.1 Sugar_F16BP_F16BP1 Fructose and mannose metabolism(0.6615606),Carbon fixation in photosynthetic organisms(0.7361554),Metabolic pathways(0.7902142),Insulin signaling pathway(0.878923),Methane metabolism(0.9082858),Microbial metabolism in diverse environments(0.9297261),Biosynthesis of secondary metabolites(0.9498542),Pentose phosphate pathway(0.975254),Glycolysis / Gluconeogenesis(0.9894463)
Pbr012401.1 Sugar_F16BP_F16BP1 Fructose and mannose metabolism(0.6615606),Carbon fixation in photosynthetic organisms(0.7361554),Metabolic pathways(0.7902142),Insulin signaling pathway(0.878923),Methane metabolism(0.9082858),Microbial metabolism in diverse environments(0.9297261),Biosynthesis of secondary metabolites(0.9498542),Pentose phosphate pathway(0.975254),Glycolysis / Gluconeogenesis(0.9894463)
Pbr035932.1 Sugar_F16BP_F16BP1 Fructose and mannose metabolism(0.6615606),Carbon fixation in photosynthetic organisms(0.7361554),Metabolic pathways(0.7902142),Insulin signaling pathway(0.878923),Methane metabolism(0.9082858),Microbial metabolism in diverse environments(0.9297261),Biosynthesis of secondary metabolites(0.9498542),Pentose phosphate pathway(0.975254),Glycolysis / Gluconeogenesis(0.9894463)