Skip to main content

Advertisement

Springer Nature is making SARS-CoV-2 and COVID-19 research free. View research | View latest news | Sign up for updates

Table 1 Summary of the Turkish genome project

From: Whole genome sequencing of Turkish genomes reveals functional private alleles and impact of genetic interactions with Europe, Asia and Africa

Sample ID Coverage SNPs Novel SNPs Indels1 Novel indels Deletions2 Novel deletions3
06A010111 36.45 3,238,983 40,780 915,917 223,334 1,939 245
08P210611 36.58 3,258,882 45,582 904,093 216,377 1,690 176
24D220611 39.68 3,274,222 46,468 912,202 219,227 1,711 202
25A220611 33.37 3,241,675 46,364 905,503 217,648 1,676 188
31P140611 36.72 3,238,064 47,316 903,106 217,024 1,718 198
32A140611 33.56 3,268,102 42,525 907,291 217,036 1,726 192
33M140611 32.41 3,255,966 43,745 902,853 214,684 1,743 197
34S291210 37.66 3,251,620 42,144 914,379 221,851 1,881 223
35C240511 34.42 3,241,914 39,450 910,516 219,466 1,735 184
38I220611 35.44 3,231,738 46,475 902,232 216,872 1,681 183
42S291210 31.33 3,254,639 44,041 887,958 208,584 1,669 168
48S210611 38.17 3,302,283 43,599 914,063 218,293 1,700 178
50G301210 37.80 3,276,506 43,416 920,203 223,146 1,930 249
52C130611 32.63 3,269,131 44,621 916,643 219,997 1,888 240
57M220611 31.60 3,213,229 42,705 891,337 212,644 1,654 182
65A220611 48.09 3,259,571 48,211 915,187 222,548 1,676 184
Non redundant Total   8,161,894 647,131 1,729,238 526,177 3,292 494
  1. 1Indels between 1–50 bp. 2Deletions >50 bp. 3Deletions that are not previously reported in the 1000 Genomes Project (both 2010 and 2012 releases).