Skip to main content

Table 4 Top 20 Vienna7 vs. wild Hawaiian type differentially regulated genes GO term enrichment

From: A genomic perspective to assessing quality of mass-reared SIT flies used in Mediterranean fruit fly (Ceratitis capitata) eradication in California

Term Annotated Significant Expected Fisher exact test p-value
Up-regulated genes
GO:1901360 Organic cyclic compound metabolic processes 1289 130 81.06 6.70E-11
GO:0090304 Nucleic acid metabolic process 948 105 59.61 7.10E-11
GO:0006259 DNA metabolic process 239 42 15.03 3.50E-10
GO:0006725 Cellular aromatic compound metabolism 1231 123 77.41 7.40E-10
GO:0006396 RNA processing 166 33 10.44 1.30E-09
GO:0006139 Nucleobase-containing compound metabolism 1166 117 73.32 2.20E-09
GO:0046483 Heterocycle metabolic process 1212 120 76.21 2.80E-09
GO:0044260 Cellular macromolecule metabolic process 1441 135 90.61 5.50E-09
GO:0090305 Nucleic acid phosphodiester bond hydroly… 78 21 4.9 5.70E-09
GO:0019079 Viral genome replication 13 9 0.82 7.70E-09
GO:0042254 Ribosome biogenesis 60 18 3.77 1.10E-08
GO:0034660 NcRNA metabolic process 74 20 4.65 1.30E-08
GO:0034641 Cellular nitrogen compound metabolic pro… 1291 123 81.18 1.90E-08
GO:0022613 Ribonucleoprotein complex biogenesis 73 19 4.59 5.70E-08
GO:0006260 DNA replication 93 21 5.85 1.60E-07
GO:0044237 Cellular metabolic process 2258 181 141.99 3.90E-07
GO:0019058 Viral infectious cycle 18 9 1.13 4.00E-07
GO:0034470 NcRNA processing 53 15 3.33 4.60E-07
GO:0006807 Nitrogen compound metabolic process 1455 128 91.49 1.30E-06
GO:0006281 DNA repair 82 17 5.16 8.90E-06
Down-regulated genes     
GO:0048468 Cell development 610 94 42.38 1.30E-15
GO:0048646 Anatomical structure formation 662 95 45.99 9.90E-14
GO:0051239 Regulation of multicellular organismal processes 413 67 28.69 5.00E-12
GO:0030182 Neuron differentiation 331 58 23 7.30E-12
GO:0003008 System process 462 70 32.1 4.20E-11
GO:0030154 Cell differentiation 927 112 64.41 4.60E-11
GO:0009653 Anatomical structure morphogenesis 761 97 52.87 8.80E-11
GO:0048869 Cellular developmental process 964 114 66.98 1.20E-10
GO:0050877 Neurological system process 385 61 26.75 1.60E-10
GO:0048699 Generation of neurons 356 58 24.73 1.60E-10
GO:0007267 Cell-cell signaling 264 48 18.34 1.70E-10
GO:0044767 Single-organism developmental process 1185 131 82.33 2.40E-10
GO:0048513 Organ development 697 90 48.43 2.90E-10
GO:0007423 Sensory organ development 191 39 13.27 3.20E-10
GO:0023052 Signaling 980 114 68.09 3.50E-10
GO:0044700 Single organism signaling 980 114 68.09 3.50E-10
GO:0048749 Compound eye development 122 30 8.48 3.90E-10
GO:0044707 Single-multicellular organism process 1699 169 118.04 4.10E-10
GO:0007154 Cell communication 996 115 69.2 4.50E-10
GO:0042692 Muscle cell differentiation 123 30 8.55 4.80E-10