| Control | Phenylalanine treated |
---|---|---|
Total number of reads | 24473594 | 23470648 |
Total nucleotides (nt) | 3671039100 | 3520597200 |
GC% | 49.31% | 47.89% |
Q20% | 95.13% | 96.06% |
Step-wise assembly | ||
  Total number of contig | 287451 | 273979 |
  Average sequence size of contigs | 199 | 191 |
  N50 length of contig | 236 | 221 |
  Total number of scaffolds | 149648 | 147381 |
  Average sequence size of scaffolds | 359 | 330 |
  N50 length of scaffold | 535 | 465 |
  Total number of unigenes | 78998 | 77541 |
  Total nucleotides (nt) in unigenes | 44279890 | 39284596 |
  Average sequence size of unigenes | 561 | 507 |
  N50 length of unigenes | 703 | 610 |
Combined control and phenylalanine treated unigenes | ||
  Total number of all unigenes | 101043 | |
  Average sequence size of all unigenes | 599 | |
  N50 length of all unigenes | 804 | |
  Unigenes with orientation | 54284 | |
  Unigenes without orientation | 46759 |