Table 3 Average running times of top 4 aligners at different read lengths.
From: RandAL: a randomized approach to aligning DNA sequences to reference genomes
| Â | 35 bp | 51 bp | 76 bp | 100 bp | 200 bp | 400 bp |
|---|---|---|---|---|---|---|
BWA-SW | 8.1 | 13.4 | 21.6 | 30.1 | 56.9 | 105.2 |
Bowtie2 | 2.8 | 4.1 | 5.8 | 8.1 | 18.3 | 41.6 |
CUSHAW2 | 4.2 | 7.8 | 12.7 | 19.3 | 67.8 | 228.5 |
RandAL | 11.1 | 12.9 | 13.6 | 14.5 | 26.2 | 81.6 |