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Table 6 Comparisons of the number of top unique BLAST hits to different transcripts from each set of predicted shared transcripts in each organism to its known transcriptome database in the test on mouse against human.

From: Heuristic pairwise alignment of de Bruijn graphs to facilitate simultaneous transcript discovery in related organisms from RNA-Seq data

10−7 mouse human 10−20 mouse human
k_c Oases Mutual Oases Mutual k_c Oases Mutual Oases Mutual
25_3 7090 7474 (+384) 7123 7548 (+425) 25_3 6169 6402 (+233) 6317 6539 (+222)
25_5 5308 5392 (+84) 5244 5318 (+74) 25_5 4666 4700 (+34) 4679 4696 (+17)
25_10 2781 2818 (+37) 2591 2612 (+21) 25_10 2452 2476 (+24) 2376 2385 (+9)
31_3 5490 5647 (+157) 5198 5387 (+189) 31_3 4421 4557 (+136) 4416 4547 (+131)
31_5 3918 3971 (+53) 3662 3732 (+70) 31_5 3221 3275 (+54) 3180 3222 (+42)
31_10 1796 1805 (+9) 1573 1594 (+21) 31_10 1531 1540 (+9) 1403 1410 (+7)
  1. Notations are the same as in Table 5.