Skip to main content

Table 2 Statistics for curated miRNA-target interactions.

From: Integrated analyses to reconstruct microRNA-mediated regulatory networks in mouse liver using high-throughput profiling

  miRNA Number of curated targets Number of DE miRNA target genes in Mir122a-/-mice
  miR-429-3p 438 39
  miR-200a-3p 394 25
  miR-200b-3p 410 25
  miR-200c-3p 382 26
  miR-182-5p 379 18
  miR-326-3p 175 16
  miR-199a-5p 249 24
  miR-673-3p 0 0
  miR-337-3p 36 2
  miR-337-5p 0 0
  miR-540-3p 0 0
  miR-431-5p 178 5
  miR-127-3p 39 1
  miR-127-5p 1 0
  miR-434-3p 7 0
  miR-434-5p 23 2
  miR-136-3p 0 0
  miR-136-5p 501 24
  miR-379-5p 138 6
  miR-379-3p 0 0
  miR-411-3p 26 2
  miR-411-5p 140 15
  miR-299a-5p 18 1
Up-regulated miR-329-3p 329 5
  miR-494-3p 427 26
  miR-1193-3p 0 0
  miR-543-3p 480 36
  miR-495-3p 644 40
  miR-376c-3p 337 18
  miR-376b-3p 227 10
  miR-376b-5p 0 0
  miR-376a-3p 11 1
  miR-300-3p 40 6
  miR-381-3p 606 45
  miR-382-5p 296 20
  miR-382-3p 1 0
  miR-134-5p 203 14
  miR-485-5p 140 9
  miR-485-3p 0 0
  miR-154-3p 0 0
  miR-154-5p 226 11
  miR-496a-3p 218 13
  miR-541-5p 298 20
  miR-409-5p 0 0
  miR-409-3p 29 2
  miR-369-3p 0 0
  miR-369-5p 0 0
  miR-410-3p 524 29
Down-regulated miR-455-3p 3 0
  miR-455-5p 0 0
  miR-31-3p 0 0
  miR-31-5p 334 36
  miR-93-5p 705 83
  miR-339-3p 0 0
  miR-335-5p 223 19
  miR-486b-5p 28 2
  miR-144-3p 709 72
  miR-451a 108 31
  miR-345-5p 18 5
  miR-17-5p 992 115
  miR-19a-3p 602 62
  miR-484 0 0
  miR-802-5p 0 0
  miR-145a-5p 262 26
  miR-322-5p 817 80
Total 65 DemiRsa 4,220b* 499c,*
  1. a includes 48 up-regulated miRNAs and 17 down-regulated miRNAs
  2. b includes 460 up-regulated target genes and 263 down-regulated target genes, for a total of 723 genes.
  3. c includes 295 up-regulated genes and 204 down-regulated genes of the 886 differentially-expressed genes found in 2-month old Mir122a-/- mouse livers [32].
  4. * indicates the unique gene count