Figure 4
From: Accurate inference of isoforms from multiple sample RNA-Seq data
The effect of ISP and Cuffmerge on differential expression analysis. Here, different numbers of the most differentially expressed isoforms are considered, and the percentage of "matched" and "correct" isoforms are calculated. "% matched" is the ratio of these isoforms matching UCSC known isoforms, and "% correct" is the ratio of the matched isoforms that have correct fold change estimations.