Skip to main content

Table 5 Whole-blood cis-eQTL conditional logistic regression results

From: Conditional entropy in variation-adjusted windows detects selection signatures associated with expression quantitative trait loci (eQTLs)

Dataset Notes Number of cis-eQTLs Num. Genes (Regions) Total GTEx Markers βH|H ± σH|H
Westra 2012 - Group 1 GO:0006367, GO:0006396, GO:0008544, GO:0042742 11,527 324 (441) 108,372 -0.003 ± 0.003
Westra 2012 - Group 2 GO:0001501, GO:0006869, GO:0006936, GO:0007186, GO:0009653, GO:0016567, GO:0018108, GO:0051056, 63,269 1,265 (1,810) 598,118 0.005 ± 0.001
Westra 2012 - Both In both Group 1 and in Group 2 1,673 17 (57) 18,447 0.006 ± 0.007
Westra 2012 - TOTAL RNA extracted from whole blood. 495,268 /923,021 15,742 (14,417) 4,606,410  
  1. As Table 1 with two additional columns reporting the effect size (β) and standard error (σ) of Adjusted Conditional Haplotype Entropy (H|H) in the hypothesis-testing phase fit to the statistical model in Eq. 1 using the Westra[11] data set.