Table 3 Distribution of simple sequence repeats among protein coding and non-coding regions of the R. solanacearum genome

Mononucleotides

   3 bp

98068

81805

83.4

16263

16.6

57345

47087

82.1

10258

17.9

   4 bp

17943

13192

73.5

4751

26.5

11216

8509

75.9

2707

24.1

   5 bp

4053

2555

63.0

1498

37.0

2560

1752

68.4

808

31.6

   6 bp

859

373

43.4

486

56.6

529

282

53.3

247

46.7

   7 bp

199

62

31.2

137

68.8

141

49

34.8

92

65.2

   8 bp

45

7

15.6

38

84.4

41

16

39.0

25

61.0

   9 bp

14

1

7.1

13

92.9

11

3

27.3

8

72.7

   10 bp

2

1

50.0

1

50.0

2

0

0

2

100

   11 bp

4

-

0

4

100

1

0

0

2

1001

   13 bp

2

-

0

4

100

-

-

-

-

-

Dinucleotides ≥ 6 bp

14727

13090

88.9

1637

11.1

7693

6699

87.1

994

12.9

Trinucleotides ≥ 9 bp

3942

3672

93.2

270

6.8

2105

1933

91.8

172

8.2

Tetranucleotides

90

77

85.6

13

14.4

51

37

72.5

14

27.5

Genome partition

87.8

12.2

86.5

13.5