Table 3 Detection of differentially expressed genes by dIVT Protocol for different functional gene categories
Functional Category P(FC< 1/2 ∪ FC> 2) | Number of Genes Detected by dIVT with >.99 | Number of Genes also Detected by IVT with | ||
|---|---|---|---|---|
>.90 | >.95 | >.99 | ||
Apoptosis regulator | 0 | 0 | 0 | 0 |
Cell-cell signaling | 10 | 8 | 7 | 4 |
Cell cycle | 9 | 4 | 1 | 0 |
Cell death | 2 | 2 | 2 | 2 |
Cell motility | 5 | 5 | 5 | 0 |
Cell proliferation | 17 | 14 | 11 | 5 |
Defense and Immunity | 6 | 6 | 4 | 2 |
Extracelullar | 16 | 13 | 12 | 5 |
Homeostasis | 1 | 0 | 0 | 0 |
Nucleic acid binding | 19 | 7 | 4 | 3 |
Pathogenesis | 5 | 5 | 3 | 1 |
Signal transduction | 21 | 14 | 12 | 7 |
Stress response | 11 | 11 | 8 | 3 |
Transport | 5 | 3 | 3 | 2 |