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Table 2 Detection of the conserved gene order between Halobacterium sp. NRC-1 and halophiles. Sequence reads matched to observed H. sp. NRC-1 genes, number of physically linked genes, and gene names or numbers are listed for each halophile.

From: Low-pass sequencing for microbial comparative genomics

Halobaculum gomorrense    
Hg11_0191 3 1384,rad3a, yvoF Hg2_0160 2 rpl30p,rps5p
Hg12_0134 3 1564,1561,1562 Hg1_0175 2 2149,etlB
Hg8_0102 3 rpI1 4,prpl24,prps4e Hg12_0110 2 cbiJ,cbiC
Hg12_0124 3 642,nolC,nuoL Hg9_0124 2 1087,1086
Hg1_0132 2 rps13p,rps4p Hg6_0157 2 ribG,1257
Hg13_0114 2 rpl24e,ndk Hg9_0157 2 rpl13p,rps9p
Hg1_0114 2 5062,5063 Hg12_0125 2 ilVE1,388
Hg2_0136 2 2160,2162 Hg10_0188 2 cobH,cbiH
Hg8_0104 2 359,357 Hg8_0128 2 5191,5189
Hg3_0132 2 2089,2091 Hg1_0174 2 rpl32e,rpl6p
Hg13_0174 2 255,256 Hg1_0168 2 417,419
Hg12_0169 2 gpdB,gpdA2 Hg7_0133 2 cat,maoC1
Hg13_0179 2 gmd,graD3 Hg11_0101 2 sus,trn30
Hg5_0173 2 1641,1642 Hg6 0161 2 2316,cbiO1
Hg12_0172 2 uroM,hem3    
Hg10_0169 2 cbiL,cbiF Natrialba asiatica
Hg3_0178 2 riml,can Na5_0165 3 rps3p,1699,rpl29p
Hg8_0132 2 1519,1518 Na7_0184 2 nolD,ndhG4
Hg1_0123 2 tfeA,755 Na11_0183 2 fbp,686
Hg7_0108 2 rpl13p, rpl18e Na6_0131 2 2534,2535
Hg8_0147 2 trn24,1390 Na1_0196 2 1530,mmdA
Hg10_0108 2 801,trn12 Na3_0196 2 yusM,2121
Hg12_0123 2 rpl19e,rpl18p Na8_0152 2 1900,1901
Hg5_0122 2 fbp,683 Na1_0112 2 po/B1,520
Hg13_0193 2 2637,bchP Na11_0168 2 rad24c,2371
Hg5_0165 2 2098,trn36 Na2_0190 2 fbp,686
Hg9_0123 2 sus,trn30 Na1_0154 2 hUtG,hutl
Hg8_0119 2 1429,1431 Na4_0122 2 hpyA,aup
Hg12_0105 2 gatA,gatC Na6_0176 2 6070,6071
Hg3_0115 2 gapB,hsp2 Na4_0158 2 rp/32e,rpl19e
Hg3_0187 2 pyrE1,gcd Na5_0119 2 1934,ftsZ3
Hg10_0181 2 854,857 Na10_0123 2 1845,ansA
Hg13_0115 2 5069,5071 Na8_0119 2 1296,1297
Hg5_0113 2 hpyA,aup Na3_0134 2 mamA,mamB
Hg8_0146 2 1783,panF Na1_0138 2 2474,2475
Hg9_0194 2 1235,1236 Na10_0113 2 htlB,cmk
Hg6_0102 2 traB,875 Na12_0184 2 220,219
Hg9_0115 2 256,258 Na1_0125 2 525,527
Hg10_0131 2 1823,moaB Na11_0176 2 404,405
Hg2_0106 2 alkK,gdhB Na12_0110 2 dtd,247
Hg11_0194 2 2205,pmu1 Na8_0103 2 2369,rad24b
Hg5_0170 2 glyA,folD Na9_0165 2 2306,2307
Hg2_0125 2 purK,purE Na11_0175 2 rps6e,2515
Hg4_0125 2 2098,trn36 Na4_0146 2 gun,purM
Hg8_0107 2 rrlA,rrlB Na5_0164 2 296,pnm
Hg2_0171 2 ndhG1,nolB Na9 0164 2 rnh,1982
Halorubrum lacusprofundi Haloarcula marismortui
HI10_0165 3 rps14p,rpl6p,rps8p Hm10_0182 3 767,768,769
HI4_0114 2 5166,5167 Hm11_0113 3 1558,1559,cbiH
HI6_0133 2 rad24c,2371 Hm8_0149 2 trkA4,phoT3
HI12_0110 2 rps5p,rpl18p Hm12_0196 2 gpdB,gpdA2
HI11_0135 2 943,945 Hm7_0109 2 mal,mamB
HI5_0115 2 alkK,gdhB Hm8_0151 2 hpyA,rpa
HI11_0152 2 alaS,2282 Hm4_0135 2 2555,trn44
HI7_0101 2 pri,1471 Hm5_0163 2 1475,1476
HI11_0159 2 981,982 Hm4_0159 2 2515,2516
HI2_0111 2 6060,6061 Hm1_0167 2 576,578
HI2_0107 2 pmm,2277 Hm6_0177 2 6434,6437
HI7_0142 2 rpl3p,1688 Hm10_0123 2 trpE2,383
HI5_0125 2 trp1,124 Hm11_0186 2 2024,yyal
HI2_0193 2 rps4p,rps11p Hm1_0106 2 rad3a,1382
HI8_0104 2 2333, cysG Hm10_0192 2 sop1 , htr1
HI7_0124 2 576,578 Hm9_0134 2 mal, mamB
HI9_0183 2 1613,mvaB Hm8_0125 2 1845,ansA
HI12_0125 2 5131,5132 Hm1_0150 2 2369,rad24b
HI7_0158 2 2316,cbiO1 Hm4_0112 2 1823,moaB
HI10_0161 2 citE.,gdhA1 Hm6_0130 2 533,534
HI2_0112 2 2241,rfcC Hm6_0112 2 1823,moaB
HI5_0112 2 2645, vacB Hm6_0149 2 alkK,gdhB
HI9_0130 2 pgi,1993 Hm1_0165 2 266,267
HI5_0127 2 1578,1580 Hm11_0158 2 noxA,1806
HI6_0173 2 6198,6197 Hm7_0164 2 dsa,lpdA
HI11_0150 2 2089, trm1 Hm5_0174 2 2160,2162
HI11_0160 2 981,982 Hm11_0116 2 mal,mamB
HI5_0134 2 trn41,rrs Hm12_0116 2 gpdB,gpdA2
HI1_0162 2 trn42,rrlB Hm8_0137 2 dsa,lpdA
HI6_0103 2 1672,1670 Hm1_0104 2 1296,1297
HI6_0131 2 pri,1468 Hm12_0184 2 rps6e,2515
HI4_0176 2 trpB,trpC Hm9_0104 2 758,759
HI10_0168 2 rpl14p,rps17p Hm11_0176 2 ndhG1,ndhG5
HI2_0170 2 2149,ettB Hm11_0135 2 trn46,rps10p
HI9_0170 2 ugpE,ugpC Hm4_0154 2 yvrO,3
HI5_0149 2 rpl6p,rps8p Hm4_0136 2 2370,rad24b
HI12_0187 2 2581,2582 Hm2_0113 2 hutG,hutl
HI6_0121 2 ndhG1,ndhG5 Hm12_0152 2 asnA,865
    Hm8_0109 2 1558,cdiH
    Hm7_0186 2 230,231
    Hm8_0134 2 361,nfi
    Hm8_0180 2 rpl14p,rpl24p
    Hm8_0177 2 711,713