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Table 1 Relative Expression levels of selected genes in target RKO colon cancer cell line

From: Improving signal intensities for genes with low-expression on oligonucleotide microarrays

Grid # ID Gene Description Expression in target cell line
1 Co1 beta actin +++
2 Co2 GAPDH +++
3 Co3 Tubulin +++
4 HK1 Ferritin heavy chain -
5 HK10 Homo sapiens keratin, hair, basic, 5 (KRTHB5) mRNA +
6 HK11 Homo sapiens lysophospholipase II (LYPLA2), mRNA -
7 HK12 Homo sapiens kinesin family protein 3B (KIF3B) mRNA +++
8 HK13 Homo sapiens tubulin-specific chaperone c (TBCC), mRNA +
9 HK14 Homo sapiens tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase (TNKS) mRNA, and translated products -
10 HK15 Homo sapiens nesca protein (NESCA), mRNA +
11 HK16 Homo sapiens myosin 5C (MYO5C), mRNA ++
12 HK17 Human myosin heavy chain 12 (MYO5A) mRNA, complete cds +
13 HK18 Homo sapiens reticulon 2 (RTN2) mRNA -
14 HK19 Homo sapiens keratin, hair, acidic,2 (KRTHA2), mRNA -
15 HK2 Ferritin L chain +++
16 HK20 Homo sapiens keratin 13 (KRT13) mRNA +
17 HK3 Phospholipase A2 +++
18 HK4 Ribosomal Protein S12 +++
19 HK5 Ribosomal protein L 12 +++
20 HK6 Ribosomal protein S9 ++
21 HK7 hypoxanthine-guanine phophoribosyltranferase ++
22 HK8 H. sapiens mRNA for myosin-I beta +
23 HK9 Homo sapiens ankyrin repeat-containing protein (G9A), mRNA +
24 Pr16 Insulin-like growth factor binding protein 2 -
25 H3 Macrophage inhibitory cytokine-1 (MIC-1) +
26 A22 Cyclin-dependent kinase inhibitor 1A (p21, Cip1) +
27 R9 Cyclin-dependent kinase inhibitor 1A (p21, Cip1) +
28 N39 Homo sapiens lymphotoxin alpha -
29 N59 Homo sapiens tumor necrosis factor -
30 N76 Excision repair cross complementation group 1 -
  1. +++ high, ++ medium, +low and - no expression of the genes