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Table 4 Top 20 contigs with the most assembled ESTs.

From: From biomedicine to natural history research: EST resources for ambystomatid salamanders

Contig ID # ESTs Best Human Match E-value
MexCluster_4615_Contig1 415 (NM_000519) delta globin E-39
MexCluster_600_Contig1 354 (NM_182985) ring finger protein 36 isoform a E-110
MexCluster_6279_Contig1 337 (NM_000559) A-gamma globin E-32
MexCluster_10867_Contig1 320 (NM_000558) alpha 1 globin E-38
MexCluster_5357_Contig1 307 (NM_000558) alpha 1 globin E-37
MexCluster_9285_Contig3 285 (NM_001614) actin, gamma 1 propeptide 0
MexCluster_7987_Contig3 252 (NM_001402) eukaryotic translation elongation f1 0
MexCluster_9285_Contig1 240 (NM_001101) beta actin; beta cytoskeletal actin 0
MexCluster_9279_Contig3 218 (NM_000223) keratin 12 E-113
MexCluster_11203_Contig1 181 (NM_002032) ferritin, heavy polypeptide 1 E-70
MexCluster_8737_Contig2 152 (NM_058242) keratin 6C E-131
MexCluster_3193_Contig1 145 (NM_004499) heterogeneous nuclear ribonucleoprotein E-90
MexCluster_8737_Contig7 134 (NM_058242) keratin 6C E-131
MexCluster_5005_Contig3 132 (NM_031263) heterogeneous nuclear ribonucleoprotein E-124
MexCluster_6225_Contig1 125 (NM_001152) solute carrier family 25, member 5 E-151
MexCluster_1066_Contig1 122 [31015660] IMAGE:6953586 E-16
MexCluster_8737_Contig4 114 (NM_058242) keratin 6C; keratin, epidermal type II E-132
MexCluster_8187_Contig2 113 (NM_005507) cofilin 1 (non-muscle) E-65
MexCluster_2761_Contig1 109 (NM_001961) eukaryotic translation elongation factor2 0
MexCluster_9187_Contig1 105 (NM_007355) heat shock 90 kDa protein 1, beta 0
A. t. tigrinum    
TigCluster_6298_Contig1 654 (NM_000519) delta globin E-38
TigCluster_10099_Contig2 193 (NM_001614) actin, gamma 1 propeptide 0
TigCluster_6470_Contig1 167 (NM_000558) alpha 1 globin E-39
TigCluster_9728_Contig2 142 (NM_000477) albumin precursor E-140
TigCluster_6594_Contig1 117 (NM_001402) eukaryotic translation elongation f1 0
TigCluster_5960_Contig1 91 (NM_001101) beta actin; beta cytoskeletal actin 0
TigCluster_7383_Contig1 77 (NM_001614) actin, gamma 1 propeptide 0
TigCluster_6645_Contig1 76 (NM_001063) transferrin 0
TigCluster_7226_Contig4 74 (NM_006009) tubulin, alpha 3 E-160
TigCluster_7191_Contig1 67 (NM_019016) keratin 24 E-89
TigCluster_10121_Contig1 64 (NM_005141) fibrinogen, beta chain preproprotein 0
TigCluster_6705_Contig1 63 (NM_000558) alpha 1 globin E-39
TigCluster_7854_Contig1 62 (NM_021870) fibrinogen, gamma chain isoform E-121
TigCluster_6139_Contig1 52 (NM_001404) eukaryotic translation elongation f1 0
TigCluster_7226_Contig2 51 (NM_006009) tubulin, alpha 3 0
TigCluster_10231_Contig1 44 (NM_003018) surfactant, pulmonary-associated prot. E-08
TigCluster_6619_Contig1 36 (NM_000041) apolipoprotein E E-38
TigCluster_7232_Contig2 35 (NM_003651) cold shock domain protein A E-46
TigCluster_5768_Contig1 34 (NM_003380) vimentin E-177
TigCluster_9784_Contig3 32 |XP_218445.1| similar to RIKEN cDNA 1810065E05 E-15