Table 2 Haplotype based estimation of gene and cluster copy numbers

1

C

A

A

T

50

19

-

5

2

G

A

A

T

-

-

16

-

3

G

A

G

C

15

18

32

9

4

G

G

G

C

65

10

16

58

5

G

A

A

C

-

-

14

-

Ratios of single haplotypes

3:1:4

2:2:1

1:2:1:1

1:1:6

Minimal gene copy number

8

5

5

8

DEFB4

5

6

7

8

9

1

2

3

4

1

C

C

C

G

A

14

-

8

-

2

C

T

G

G

A

-

17

9

5

3

T

C

C

A

G

8

-

8

-

4

T

C

C

G

G

24

68

11

30

Ratios of single haplotypes

2:1:3

1:4

1:1:1:1

1:6

Minimal Gene copy number

6

5

4

7

Minimal DEF cluster b copy number

8

5

5

8