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Table 1 Prokaryotes of complete genomic data analysed and the distribution of encoded STYKs and homologues. The list includes ABC1, RI01 and kinases that share significant sequence similarity with STYK family. Number in parenthesis indicates the sequences lacking catalytic Asp and hence are unlikely to function as a kinase.

From: Diversity in domain architectures of Ser/Thr kinases and their homologues in prokaryotes

Organism

STYK

ABC1

RIO1

ARCHAEA

   

Aeropyrum pernix

7

-

2

Archaeoglobus fulgidus

2

-

2

Halobacterium salinarium

5 (1)

1

2

Methanococcus janaschii

4

-

2

Methanopyrus kandleri

1

-

1

Methanosarcina acetivorans

5

2

2

Methanosarcina mazei Goe1

4

1

2

Methanothermobacter thermoautotrophius

3

1

1

Nanoarchaeum equitans

3

-

2

Pyrobaculum aerophilum

4

-

2

Pyrococcus abysii

4

-

2

Pyrococcus horikoshii

4

-

2

Sulfolobus solfataricus

7

1

2

Sulfolobus tokodaii

11

1

2

Thermoplasma acidophilum

3

1

1

Thermoplasma volcanium

4

1

2

BACTERIA

   

Agrobacterium tumefaciens str. C58

2

1

-

Aquifex aeolicus

2

-

1

Bacillus anthracis str. Ames

3

-

-

Bacillus cereus ATCC 14579

6

2

-

Bacillus halodurans

4

1

-

Bacillus subtilis

3

-

-

Bacteroides thetaiotaomicron VPI-5482

2

-

-

Bifidobacterium longum NCC2705

7

1

-

Bordetella bronchiseptica

2

1

-

Bordetella parapertussis

2

1

-

Bordetella pertussis

2

1

-

Borrelia burgdorferi

-

-

-

Bradyrhizobium japonicum

5

1

1

Brucella melitensis

-

-

-

Brucella suis

2

2

-

Buchnera aphidicola

-

-

-

Buchnera sp. APS

-

-

-

Candidatus Blochmannia floridanus

1

1

-

Caulobacter crescentus

1

1

-

Chlamydia muridarium

1(1)

-

-

Chlamydophila pneumoniae J138

3 (1)

-

-

Chlamydia trachomatis

3 (1)

-

-

Chlamydophila caviae GPIC

3 (1)

-

-

Chlamydophila pneumoniae AR39

3 (1)

-

-

Chlorobium tepidum TLS

-

-

-

Chromobacterium violaceum ATCC 12472

3

2

-

Clostridium acetobutylicum

3

1

-

Clostridium perfringens

2

1

-

Clostridium tetani E88

1

-

-

Corynebacterium diphtheriae

4

-

-

Corynebacterium efficiens YS-314

4

-

-

Corynebacterium glutamicum ATCC 13032

4

-

-

Coxiella burnetii RSA 493

4

1

-

Deinococcus radiodurans

10

-

1

Enterococcus faecalis V583

2

-

-

Escherichia coli K12

4

1

-

Escherichia coli O157:H7 EDL933

4

1

-

Fusobacterium nucleatum subsp. nucleatum ATCC 25586

1

-

-

Geobacter sulfurreducens PCA

1

-

-

Gloeobacter violaceus[B]4.7NC_005125

19 (1)

4

-

Haemophilus ducreyi

2

1

-

Haemophilus influenzae

1

-

-

Helicobacter hepaticus ATCC 51449

-

-

-

Helicobacter pylori J99

1

-

-

Lactobacillus plantarum WCFS1

3

1

-

Lactococcus lactis

1

-

-

Leptospira interrogans

5 (2)

2

-

Mesorhizobium meliloti

3

1

-

Mycobacterium avium subsp. paratuberculosis

12

2

-

Mycobacterium bovis

10

2

-

Mycobacterium leprae

6

2

-

Mycobacterium tuberculosis

13

2

-

Mycoplasma gallisepticum

1

-

-

Mycoplasma genitalium

1

-

-

Mycoplasma penetrans

1

-

-

Mycoplasma pneumoniae

1

-

-

Mycoplasma pulmonis

1

-

-

Neisseria meningititis

1

1

-

Nitrosomonas europaea

2

2

-

Nostoc sp. PCC 7120

53

4

-

Oceanobacillus iheyensis

1

-

-

Onion yellows phytoplasma

-

-

-

Pasteurella multocida

2

1

-

Photorhabdus luminescens subsp. laumondii

1

1

-

Pirellula sp.

59 (1)

2

-

Porphyromonas gingivalis W83

1

-

-

Prochlorococcus marinus MED4

3

3

-

Prochlorococcus marinus MIT 9313

4

3

-

Prochlorococcus marinus subsp. pastoris str.

3

3

-

Pseudomonas aeruginosa

11

1

1

Pseudomonas putida KT2440

14 (2)

-

2

Pseudomonas syringae

22

2

2

Ralstonia solanacearum

3

1

-

Rhodopseudomonas palustris

5 (3)

1

-

Rickettsia conorii

1

1

-

Rickettsia prowazekii

1

1

-

Salmonella enterica subsp. enterica serovar Typhi Ty2

4

1

-

Salmonella typhimurium LT2

2

1

-

Shewanella oneidensis MR-1

8 (2)

1

1

Shigella flexneri 2a str. 2457T

3

1

-

Sinorhizobium meliloti

1

1

-

Staphylococcus aureus

2

-

-

Staphylococcus epidermidis ATCC 12228

1

-

-

Streptococcus mutans UA159

1

-

-

Streptococcus pyogenes M1 GAS

1

-

-

Streptococcus pyogenes SSI-1

1

-

-

Streptomyces avermitilis

34 (2)

1

-

Streptomyces coelicolor A3

18

-

-

Synechococcus sp. WH 8102

3

3

-

Synechocystis

12 (1)

5

-

Thermoanaerobacter tengcongensis

1

-

-

Thermosynechococcus elongatus

14

-

-

Thermotoga maritima

1 (1)

1

-

Treponema pallidum

-

-

-

Tropheryma whipplei str Twist

4 (2)

-

-

Ureaplasma ureolyticum

1

-

-

Vibrio cholerae

2

1

-

Vibrio parahaemolyticus RIMD 2210633

6

1

-

Vibrio vulnificus CMCP6

5

1

-

Wigglesworthia brevipalpis

1

1

-

Wolinella succinogenes

1

1

-

Xanthomonas axonopodis pv. citri str. 306

5

-

-

Xanthomonas campestris pv. campestris str. ATCC 33913

1

-

-

Xylella fastidiosa

3

1

1

Xylella fastidiosa Temecula1

3

1

1

Yersinia pestis

4

1

1

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BMC Genomics

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