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Table 2 Correlation coefficients of the signal ratio1 data sets reported from six replicate micrroarrays2

From: Construction and validation of a Bovine Innate Immune Microarray

  

ConA-Cy3

ConA-Cy5

  

Slide 1

Slide 2

Slide 3

Slide 4

Slide 5

Slide 6

ConA-Cy3

Slide 1

1

     
 

Slide 2

0.919

1

    
 

Slide 3

0.943

0.924

1

   

ConA-Cy5

Slide 4

0.828

0.800

0.847

1

  
 

Slide 5

0.896

0.870

0.909

0.933

1

 
 

Slide 6

0.806

0.789

0.840

0.929

0.920

1

Average Ratio Correlation (all data)

0.88

   

Average Ratio Correlation (ConA = Cy3)

0.93

   

Average Ratio Correlation (ConA = Cy5)

0.93

   
  1. 1 The signal ratio was calculated by dividing ConA signal divided by Unstimulated signal for each element
  2. 2 The schematic diagram of experimental design is depicted in figure 3
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BMC Genomics

ISSN: 1471-2164

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