Table 2 Contig groups according to several levels of sequence identity based on 100 nt of overlap
From: Generation, annotation, analysis and database integration of 16,500 white spruce EST clusters
Number of contigs per group | Â Â Â Â Â 90%Â Â Â Â Â | Â Â Â Â Â 96%Â Â Â Â Â | Â Â Â Â Â 98%Â Â Â Â Â | Â Â Â Â Â 99%Â Â Â Â Â |
|---|---|---|---|---|
1 | 10,036 | 10,997 | 11,767 | 13,295 |
2 | 1,576 | 1,422 | 1,377 | 1,083 |
3 | 443 | 386 | 341 | 210 |
4 | 175 | 153 | 103 | 61 |
5 | 93 | 72 | 48 | 22 |
6 | 52 | 40 | 26 | 6 |
7 | 15 | 17 | 10 | 2 |
8 | 13 | 8 | 7 | 1 |
9 | 10 | 1 | 3 | 1 |
≥10 | 21 | 12 | 3 | 3 |
Total number of groups | 12,435 | 13,109 | 13,686 | 14,685 |