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Table 3 Gene Ontologya(Molecular function) of the sequences with a significant blastx hit in SwissProt

From: An EST-based approach for identifying genes expressed in the intestine and gills of pre-smolt Atlantic salmon (Salmo salar)

Molecular Functionb

Nr of Hits

%antioxidant activity

10

   %glutathione-disulfide reductase activity

2

   %peroxidase activity

5

%binding

505

   %antigen binding

1

   %carbohydrate binding

5

   %cofactor binding

1

   %drug binding

1

   %glycosaminoglycan binding

12

   %isoprenoid binding

1

   %lipid binding

23

   %metal ion binding

103

   %nucleic acid binding

208

   %nucleotide binding

132

   %peptide binding

3

   %protein binding

112

   %pyridoxal phosphate binding

1

   %receptor binding

17

   %selenium binding

1

   %steroid binding

2

   %tetrapyrrole binding

2

   %vitamin binding

1

%catalytic activity

358

   %helicase activity

15

   %hydrolase activity

162

   %integrase activity

1

   %isomerase activity

22

   %kinase activity

28

   %ligase activity

22

   %lyase activity

11

   %oxidoreductase activity

88

   %small protein activating enzyme activity

2

   %small protein conjugating enzyme activity

8

   %transferase activity

59

   %transposase activity

2

%chaperone activity

23

   %heat shock protein activity

7

%enzyme regulator activity

30

   %caspase regulator activity

1

   %enzyme activator activity

10

   %enzyme inhibitor activity

16

   %GTPase regulator activity

9

   %kinase regulator activity

3

   %nitric-oxide synthase regulator activity

1

%molecular_function unknown

29

%motor activity

11

   %microtubule motor activity

2

%signal transducer activity

54

   %receptor activity

26

   %receptor binding

17

   %receptor signaling protein activity

4

%structural molecule activity

160

   %extracellular matrix structural constituent

2

   %structural constituent of bone

1

   %structural constituent of cytoskeleton

10

   %structural constituent of eye lens

2

   %structural constituent of muscle

2

   %structural constituent of ribosome

103

%transcription regulator activity

42

   %RNA polymerase I transcription factor activity

1

   %RNA polymerase II transcription factor activity

5

   %transcription cofactor activity

11

   %transcription factor activity

24

   %transcriptional repressor activity

3

%translation regulator activity

21

   %translation factor activity, nucleic acid binding

21

%transporter activity

156

   %amine/polyamine transporter activity

2

   %auxiliary transport protein activity

1

   %carbohydrate transporter activity

1

   %carrier activity

66

   %channel/pore class transporter activity

8

   %drug transporter activity

1

   %electron transporter activity

34

   %intracellular transporter activity

3

   %ion transporter activity

58

   %lipid transporter activity

5

   %neurotransmitter transporter activity

2

   %organic acid transporter activity

3

   %oxygen transporter activity

6

   %peptide transporter activity

2

   %protein transporter activity

33

  1. a A selection of GO categories is presented. All annotations are accessible at http://www.salmongenome.no/
  2. b Indented terms are 'children' of the above 'parent' term.