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Table 4 Kegg Biochemical pathway mappings for A. caninum and A. ceylanicum clusters

From: Investigating hookworm genomes by comparative analysis of two Ancylostoma species

 

AC

Clusters per library

 

AE

Clusters per library

 

Total # of enzymes in KEGG

KEGG CATEGORY REPRESENTEDa

Clb

iL3

taL3

ssL3

Mixed

Enzc

Clb

iL3

Ad

Mixed

Enzc

 

1. Carbohydrate metabolism

            

   1.1 Glycolysis / Gluconeogenesis

23

13

0

5

5

22

25

10

11

4

23

40

   1.2 Citrate cycle (TCA cycle)

17

8

0

4

5

16

15

4

8

3

15

23

   1.3 Pentose phosphate pathway

9

3

0

4

2

9

12

5

3

4

8

34

   1.4 Pentose and glucuronate interconversions

8

3

0

3

2

9

9

5

4

0

8

53

   1.5 Fructose and mannose metabolism

14

6

0

4

4

15

20

7

11

2

15

61

   1.6 Galactose metabolism

10

4

0

4

2

8

12

6

5

1

12

37

   1.7 Ascorbate and aldarate metabolism

7

4

0

2

1

4

5

5

0

0

4

29

   1.8 Pyruvate metabolism

25

11

0

11

3

23

27

8

17

2

26

67

   1.9 Glyoxylate and dicarboxylate metabolism

13

6

0

5

2

14

9

1

5

3

17

58

   1.10 Propanoate metabolism

22

7

1

10

4

20

25

11

8

6

22

46

   1.11 Butanoate metabolism

22

9

1

7

5

23

29

14

14

1

26

52

   1.12 C5-Branched dibasic acid metabolism

4

3

0

1

0

2

2

1

0

1

1

20

   1.13 Inositol metabolism

6

2

0

1

3

4

7

2

3

2

4

5

2. Energy metabolism

            

   2.1 Oxidative phosphorylation

24

7

0

6

11

11

33

10

14

9

13

14

   2.2 ATP synthesis

8

2

0

3

3

1

11

4

3

4

1

1

   2.4 Carbon fixation

11

3

0

3

5

11

11

3

5

3

13

23

   2.5 Reductive carboxylate cycle (CO2 fixation)

12

7

0

1

4

8

9

2

4

3

7

13

   2.6 Methane metabolism

6

4

0

0

2

5

6

0

4

2

6

26

   2.7 Nitrogen metabolism

11

2

0

5

4

14

12

5

5

2

15

64

   2.8 Sulfur metabolism

5

1

0

1

3

9

6

3

1

2

9

30

3. Lipid metabolism

            

   3.1 Fatty acid biosynthesis (path 1)

6

2

0

3

1

11

7

3

3

1

6

14

   3.2 Fatty acid biosynthesis (path 2)

8

2

0

5

1

6

6

3

2

1

5

8

   3.3 Fatty acid metabolism

14

6

1

6

1

17

21

13

7

1

16

28

   3.4 Synthesis and degradation of ketone bodies

2

0

0

1

1

2

8

4

3

1

3

6

   3.5 Sterol biosynthesis

4

1

1

2

0

4

4

2

2

0

9

35

   3.6 Bile acid biosynthesis

11

7

1

2

1

11

11

6

4

1

10

27

   3.8 Androgen and estrogen metabolism

7

5

0

2

0

9

7

4

3

0

8

26

4. Nucleotide metabolism

            

   4.1 Purine metabolism

27

11

0

11

5

28

32

14

11

7

32

99

   4.2 Pyrimidine metabolism

16

8

1

5

2

15

22

9

12

1

22

61

   4.3 Nucleotide sugars metabolism

6

4

0

0

2

3

4

2

2

0

4

30

5. Amino acid metabolism

            

   5.1 Glutamate metabolism

11

3

0

5

3

14

16

8

7

1

18

36

   5.2 Alanine and aspartate metabolism

14

1

0

8

5

15

14

5

6

3

15

38

   5.3 Glycine, serine and threonine metabolism

19

7

0

9

3

14

21

8

10

3

24

56

   5.4 Methionine metabolism

6

1

0

4

1

9

6

5

1

0

8

24

   5.5 Cysteine metabolism

8

2

0

2

4

11

7

5

2

0

9

23

   5.6 Valine, leucine and isoleucine degradation

16

3

1

8

4

16

22

11

6

5

18

32

   5.7 Valine, leucine and isoleucine biosynthesis

7

1

0

4

2

7

9

6

2

1

8

15

   5.8 Lysine biosynthesis

11

1

0

6

4

10

9

4

3

2

8

31

   5.9 Lysine degradation

19

8

0

8

3

14

19

12

6

1

17

47

   5.10 Arginine and proline metabolism

18

4

0

8

6

20

22

11

7

4

20

71

   5.11 Histidine metabolism

10

4

0

4

2

8

10

5

4

1

8

39

   5.12 Tyrosine metabolism

18

8

0

7

3

19

19

11

5

3

19

67

   5.13 Phenylalanine metabolism

13

5

0

3

5

11

14

7

6

1

12

40

   5.14 Tryptophan metabolism

17

8

0

8

1

15

22

16

4

2

18

61

   5.15 Phenylalanine, tyrosine and tryptophan biosynthesis

5

1

0

2

2

6

4

2

0

2

7

31

   5.16 Urea cycle and metabolism of amino groups

10

1

0

5

4

14

10

2

6

2

11

35

6. Metabolism of other amino acids

            

   6.1 beta-Alanine metabolism

14

4

1

7

2

13

11

8

1

2

10

32

   6.2 Taurine and hypotaurine metabolism

1

0

0

0

1

1

2

2

0

0

3

14

   6.3 Aminophosphonate metabolism

4

0

0

3

1

3

5

2

3

0

5

15

   6.4 Selenoamino acid metabolism

7

0

0

4

3

12

12

6

4

2

15

22

   6.5 Cyanoamino acid metabolism

2

1

0

1

0

1

7

5

1

1

6

19

   6.6 D-Glutamine and D-glutamate metabolism

2

0

0

1

1

2

2

1

0

1

2

12

   6.7 D-Arginine and D-ornithine metabolism

3

1

0

0

2

2

3

0

2

1

2

10

   6.9 Glutathione metabolism

5

1

0

0

4

4

9

5

3

1

6

27

7. Metabolism of complex carbohydrates

            

   7.1 Starch and sucrose metabolism

18

2

0

13

3

18

20

13

6

1

20

75

   7.2 N-Glycans biosynthesis

7

4

0

1

2

7

7

2

4

1

9

27

   7.3 O-Glycans biosynthesis

3

1

0

1

1

2

6

5

1

0

3

8

   7.5 Aminosugars metabolism

6

3

0

2

1

6

10

5

5

0

10

39

   7.8 Glycosaminoglycan degradation

1

1

0

0

0

1

1

1

0

0

1

13

   7.9 Chondroitin / Heparan sulfate biosynthesis

5

3

0

1

1

4

6

2

4

0

4

18

   7.10 Keratan sulfate biosynthesis

1

0

0

1

0

1

2

1

1

0

1

6

8. Metabolism og complex lipids

            

   8.1 Glycerolipid metabolism

24

10

0

9

5

22

25

10

13

2

22

80

   8.3 Inositol phosphate metabolism

8

4

0

4

0

4

8

5

2

1

3

25

   8.4 Sphingophospholipid biosynthesis

1

1

0

0

0

1

2

1

1

0

2

8

   8.5 Phospholipid degradation

3

2

0

0

1

3

1

1

0

0

1

11

   8.6 Sphingoglycolipid metabolism

11

1

1

9

0

7

10

8

2

0

4

20

   8.9 Globoside metabolism

2

1

0

1

0

2

2

1

1

0

1

12

   8.11 Prostaglandin and leukotriene metabolism

8

2

0

1

5

8

7

4

3

0

6

19

9. Metabolism of cofactors and vitamins

            

   9.2 Riboflavin metabolism

4

1

0

3

0

2

2

2

0

0

2

13

   9.3 Vitamin B6 metabolism

6

4

0

1

1

3

6

4

1

1

5

23

   9.4 Nicotinate and nicotinamide metabolism

11

2

0

7

2

7

15

8

7

0

7

32

   9.5 Pantothenate and CoA biosynthesis

8

2

0

4

2

9

8

6

2

0

7

27

   9.7 Folate biosynthesis

5

2

1

0

2

5

6

1

4

1

5

25

   9.8 One carbon pool by folate

5

3

0

2

0

10

7

3

3

1

8

24

   9.10 Porphyrin and chlorophyll metabolism

18

4

0

10

4

12

27

15

8

4

13

56

   9.11 Ubiquinone biosynthesis

19

10

0

5

4

13

28

11

14

3

14

22

10. Biosynthesis of secondary metabolites

            

   10.1 Terpenoid biosynthesis

0

0

0

0

0

0

2

0

2

0

4

12

   10.3 Flavonoids, stilbene and lignin biosynthesis

6

3

0

1

2

7

8

5

3

0

7

39

   10.4 Alkaloid biosynthesis I

5

2

0

3

0

6

3

3

0

0

5

36

   10.8 Streptomycin biosynthesis

2

0

0

2

0

3

4

2

1

1

4

14

   10.9 Erythromycin biosynthesis

2

0

0

2

0

3

3

2

1

0

3

6

11. Biodegradation of xenobiotics

            

   11.4 Nitrobenzene degradation

4

1

0

3

0

5

4

2

1

1

3

17

   11.9 Tetrachloroethene degradation

6

4

0

1

1

3

2

2

0

0

3

5

   11.10 Styrene degradation

4

2

0

2

0

3

6

5

0

1

5

18

   11.1 gamma-Hexachlorocyclohexane degradation

6

3

0

3

0

5

5

3

2

0

4

12

   11.1 Fluorene degradation

3

1

0

2

0

4

2

2

0

0

2

13

   11.2 Benzoate degradation via CoA ligation

22

8

1

10

3

18

25

14

10

1

18

38

   11.2 Benzoate degradation via hydroxylation

7

2

0

5

0

7

5

4

1

0

5

45

  1. aA. caninum – 839 multiple and 786 unique mappings; A. ceylanicum – 957 multiple and 840 unique mappings. b Cluster, c Enzymes
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