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Table 1 Comparison of the CDSs of S. epidermidis ATCC 12228 and S. epidermidis RP62A

From: Conserved genes in a path from commensalism to pathogenicity: comparative phylogenetic profiles of Staphylococcus epidermidis RP62A and ATCC12228

  S. epidermidis ATCC12228a S. epidermidis RP62Aa
Total CDS number 2419 2494
CDSs categorized by sequence variations   
All homologs 2094 2103
   Total orthologs 2053 2053
Orthologs with identical DNA sequences 859 859
Orthologs with SNPs and the same lengthb 931 931
Orthologs with insertions/deletions 263 263
   Paralogs 41 50
Unique compared to the other S. epidermidisc 325 391
   Unique compared to all staphylococcal 288 315
  1. a Genomic data of S. epidermidis ATCC12228 (accession no. AE015934) and S. epidermidis RP62A (accession no. CP000029) are according to GeneBank.
  2. b These CDSs were used in analyzing the variation of single-nucleotide polymorphisms (SNPs) between two S. epidermidis genome.
  3. c These CDSs were specific to each other.