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Table 2 Gene expression data of L. plantarum, growth of ccpA mutant vs wild-type

From: Lactobacillus plantarum gene clusters encoding putative cell-surface protein complexes for carbohydrate utilization are conserved in specific gram-positive bacteria

    

ccpA mutant/wild-type

cluster

gene

Csc family

product

Ma

P-value

I

LPL1450

B

extracellular protein

1.00

0.0008

 

LPL1449

B

extracellular protein

1.22

0.0003

 

LPL1448

A

cell surface protein precursor

1.24

0.0002

 

LPL1447

D

cell surface protein precursor

1.36

0.0002

 

LPL1446

B

extracellular protein

1.20

0.0006

II

LPL2175

B

extracellular protein

1.35

0.0005

 

LPL2174

A

cell surface protein precursor

0.79

0.0048

 

LPL2173

C

extracellular protein

0.71

0.0032

III

LPL2978

B

extracellular protein

0.08

0.7133

 

LPL2977

A

cell surface protein precursor

0.90

0.0005

 

LPL2976

D

cell surface protein precursor

0.59

0.0077

 

LPL2975

C

extracellular protein

0.37

0.0466

IV

LPL3067

B

extracellular protein

2.00

0.0001

 

LPL3066

A

cell surface protein precursor

1.85

0.0001

 

LPL3065

D

cell surface protein precursor

1.49

0.0002

 

LPL3064

C

extracellular protein

1.51

0.0001

V

LPL3075

C

cell surface protein (putative)

-0.16

0.0780

 

LPL3074

D

cell surface protein precursor

0.32

0.0357

 

LPL3073

B

extracellular protein

0.01

0.0600

 

LPL3072

A

cell surface protein precursor

-0.68

0.0016

VI

LPL3117

C

cell surface protein (putative)

1.54

0.0002

 

LPL3116

B

extracellular protein

1.76

0.0002

 

LPL3115

A

cell surface protein precursor

1.85

0.0000

VII

LPL3414

B

extracellular protein

1.21

0.0006

 

LPL3413

A

cell surface protein precursor

0.86

0.0079

 

LPL3412

B

extracellular protein

0.63

0.0056

VIII

LPL3454

D

cell surface protein (putative)

0.67

0.0087

 

LPL3453

B

extracellular protein

0.79

0.0013

 

LPL3452

B

extracellular protein

1.26

0.0002

 

LPL3451

A

cell surface protein precursor

1.13

0.0008

 

LPL3450

C

extracellular protein

1.46

0.0006

IX

LPL3679

B

extracellular protein

-0.17

0.0159

 

LPL3678

A

cell surface protein precursor

0.12

0.1040

 

LPL3677

D

cell surface protein precursor

0.49

0.0220

 

LPL3676

C

extracellular protein

0.70

0.0018

  1. a M = 2log of the expression ratio's, calculated as the average expression level observed in the ccpA mutant divided by the average expression ratio observed in the wild-type.
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BMC Genomics

ISSN: 1471-2164

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