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Table 4 P. trichocarpa kinesins and their structural features

From: Comprehensive comparative analysis of kinesins in photosynthetic eukaryotes

Gene ID Protein length EST Additional Domains MD location # of exons Family
LG_VIII000260 429 Yes   I 10 UG
LG_II000635 921 No CC, ARM N 19 UG
LG_III0949 943 Yes CC, ARM N 20 UG
LG_II000522 970 No CC, VWA N 23 4
LG_VII000272 1036 Yes CC N 25 4
00020976a 1290 Yes CC N 27 4
02310007a 1280 No CC N 27 4
00160756a 1031 No CC N 22 5
LG_I001798 1077 No CC N 22 5
00060694a 1049 No CC N 23 5
LG_XVI0226 1031 Yes TM N 23 5
LG_XIII0655 944 Yes CC N 23 6
LG_XII000185 964 Yes CC N 13 7
scaffold 28000071 952 No CC N 14 7
LG_IX0409 939 Yes CC N 14 7
570109b 909 Yes   N 17 7
LG_II000243 915 No   N 13 7
00020745a 701 No   N 18 7
00160532a 939 Yes CC N 23 7
LG_IV1283 1139 Yes CC, ZF N 25 7
LG_XIV000016 817 Yes CC N 19 7
LG_VI0681 1233 Yes CC N 27 7
00120495a 784 Yes CC I 7 8
00151235a 656 No HHH N 17 10
LG_VIII001511 853 No CC N 8 10
LG_X000373 964 Yes CC N 6 10
01300020a 2921 No CC N 35 12
LG_IX000131 1300 No CC N 22 12
00012593a 1196 No CC, KR N 15 12
LG_XIV000891 1278 Yes CC, KR N 17 12
LG_II001048 1281 No CC, KR N 17 12
00100152a 814 Yes CC I 12 13
02100029a 734 Yes   I 11 13
01330083a 1022 No CC, CH I 19 14
00140705a 957 Yes CH I 18 14
00120480a 847 No CC, CH C 18 14
00150291a 1020 No CC, CH C 19 14
LG_III001053 1133 No CC, CH I 21 14
1400045b 1085 Yes CH I 16 14
00060440a 1079 No CH I 17 14
00111158a 1129 No CC I 16 14
LG_I003040 1212 No CC I 16 14
LG_II001016 1046 Yes CC I 19 14
00130189a 778 No CC I 13 14
02560013a 767 No CC I 12 14
07000001a 498 Yes   I 10 14
LG_I000011 947 No CC N 11 14
LG_XIII000327 637 No CC I 10 14
LG_VII001210 1070 No CC N 21 14
LG_XI1218 1232 Yes MyTH4, B4.1, CC C 23 14
LG_XI0089 801 Yes CC C 16 14
LG_XI000300 752 Yes CC C 16 14
  1. aFor sequence acquisition at JGI, prefix with "eugene3." bFor sequence acquisition at JGI, prefix with "estext_fgeneshl_pg_vl.C_". Other possible kinesins with truncated motor domains: fgenesl_pg.C_LG_I000890, 0344001b, 00700259b and 08910001b. MyTH4, Myosin tail homology 4; B4.1, Band 4.1; CC, Coiled-coil; KR, Kinesin-Related; VWA, Von Willebrand factor type A; CH, Calponin homology; ARM, Armadillo repeat; HHH, Helix-hairpin-helix; ZF, Zing finger; TM, Transmembrane domain; UG, Ungrouped; N, N-terminal; I, Internal; C, C-terminal.