Table 6 Genomic datasets used in this study.
From: Generation, annotation and analysis of ESTs from Trichoderma harzianum CECT 2413
Species | Taxa | Data origin |
|---|---|---|
Aspergillus nidulans | Ascomycete | Broad Institute. Data as of 07/03/2003 [69]. |
Ashbya gossypii | Ascomycete | Ashbya genome database. Data as of release 2.1 [70]. |
Arabidopsis thaliana | Plant | The TIGR Arabidopsis thaliana database. Data as release 5.0 [71]. |
Caenorhabditis elegans | Animal | The worm database. Data as of v.150 [72]. |
Candida albicans | Ascomycete | The Candida genome database. Data as of 16/7/2005 [73]. |
Cryptococcus neoformans | Basidiomycete | Stanford University. Data as of v.040623 [74]. |
Drosophila melanogaster | Animal | Flybase. Data as of release 4.2.1 [75]. |
Fusarium graminearum | Ascomycete | Broad Institute. Data as of 11/03/2003 [76]. |
Magnaporthe grisea | Ascomycete | Broad Institute. Data as of 31/10/2003 [77]. |
Neurospora crassa | Ascomycete | Broad Institute. Data as of release 7 [78]. |
Oryza sativa | Plant | The TIGR rice genome annotation. Data as of release 3.0 [79]. |
Saccharomyces cerevisiae | Ascomycete | Saccharomyces genome database. Data as of 27/8/2004 [80]. |
Schizosaccharomyces pombe | Ascomycete | The Sanger Institute. Data as of 18/8/2005 [81]. |
Trichoderma reesei | Ascomycete | The Joint Genome Institute. Data as v1.2 predicted proteins [82]. |
Ustilago maydis | Basidiomycete | Broad Institute. Data as of 01/04/2004 [83]. |