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Table 3 Takifugu rubripes protein genes under positive Darwinian selection with significantly lower (a) or higher (b) distance to the human ortholog than other fish species. Duplicated genes are given with rate differences between the two copies according to the relative rate test of Tajima (1993) at the 5% level with one asterisk and at the 1% level with two asterisks.

From: Many genes in fish have species-specific asymmetric rates of molecular evolution

JGI Acc# annotation according to human (UniGene) duplicate rate difference
FRUP00000147506 syntaxin 3A a 0.178**
FRUP00000132184 lysyl oxidase-like 1 a 0.207**
FRUP00000139282 chloride intracellular channel 5 a 0.074
FRUP00000156028 twisted gastrulation a -
FRUP00000136434 mitochondrial elongation factor G1 a 0.170*
FRUP00000139600 TAFA2 a -
FRUP00000129212 serine/threonine protein kinase 6 a -
FRUP00000153498 exostosin 1 a 0.086
FRUP00000133663 zinc finger protein 106 homolog b 0.201**
FRUP00000162759 hydroxysteroid (17-beta) dehydrogenase 4 a -
FRUP00000133083 dUTP pyrophosphatase a -
FRUP00000133686 excision repair cross-complementing 1 isoform 2 a -
FRUP00000132409 cytochrome c oxidase subunit Va a -
FRUP00000129950 glycine cleavage system protein H a -
FRUP00000140923 mitogen-activated protein kinase kinase kinase kinase 2 a -
FRUP00000157532 tryptophan rich basic protein a -
FRUP00000133839 stress-induced-phosphoprotein 1 a -
FRUP00000136741 dual specificity phosphatase 14 a -
FRUP00000148346 transitional epithelia response protein a -
FRUP00000149078 drebrin-like a -
FRUP00000151439 jumonji domain containing 2C a 0.319**
FRUP00000134740 tumor necrosis factor type 1 receptor associated protein a 0.099**
FRUP00000133087 leprecan-like 1 a 0.317**
FRUP00000144902 calcium binding protein 5 a 0.012
FRUP00000162608 neurogenic differentiation 4 a -
FRUP00000130779 FLJ21963 protein a -
FRUP00000143840 thioredoxin domain containing a -
FRUP00000154905 terminal deoxynucleotidyltransferase interacting factor 1 a -
FRUP00000128255 SMILE protein a -