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Archived Comments for: Cross genome comparisons of serine proteases in Arabidopsis and rice

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  1. Regarding At1g76140

    Ratnesh Singh, University of Hawaii at Manoa

    22 May 2007

    In supplemental data 1 author described At1g76140 as a prolyl oligopeptidase that doesnot contain S9N (beta proppeller) domain and its localization couldnot be predicted by targetp. Actually At1g76140 contains Both domains (S9N and SP9)

    http://www.sanger.ac.uk/cgi-bin/Pfam/swisspfamget.pl?name=Q8RXQ7

    and TargetP V1.1 predicts its location in chloplast.

    celluar localization prediction

    ### targetp v1.1 prediction results ##################################

    Number of query sequences: 2

    Cleavage site predictions included.

    Using PLANT networks.

    Name Len cTP mTP SP other Loc RC Tplen

    ----------------------------------------------------------------------

    At1g23080_NP_173463. 731 0.073 0.312 0.076 0.822 _ 3 -

    At1g76140_NP_177741. 795 0.938 0.151 0.017 0.003 C 2 60

    ----------------------------------------------------------------------

    cutoff 0.000 0.000 0.000 0.000

    Competing interests

    None declared

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