Segment | Region amplified (Accession number : AY138809)a | Oligonucleotide primersb | Primer names | Length (bp) of amplified region |
---|---|---|---|---|
A | (304–629)C | 5'-TTAGGCATATG ACAGCAAACACTCGCCACATGG-3' | DOTF | 345 bp |
 |  | 5'-AATATGTCGAC TCATTTCGGTTTTCCTACTTTCCTCC-3' | DOTR2 |  |
P | (8147–8254,1–332)C | 5'-GGCCCGGTACC GTGGAGGAAAGTAGGAAAACCG-3' | pOIf | 459 bp |
 |  | 5'-CCCGTCGAC CCCACGTCTTTTTTTAATTTAAAGG-3' | pOIr |  |
AP | (8147–8254,1–629)C | 5'-TTAGGCATATG ACAGCAAACACTCGCCACATGG-3' | DOTF | 754 bp |
 |  | 5'-CCCGTCGAC CCCACGTCTTTTTTTAATTTAAAGG-3' | pOIr |  |
pAP | (8147–8254,1–861)C | 5'-AACGGTTAATACGTTCTAACTG-3' | ValC | 978 bp |
 |  | 5'-CCCGTCGAC CCCACGTCTTTTTTTAATTTAAAGG-3' | pOIr |  |
p2AP | (8147–8254,1–939)C | 5'-GGCTCTAGAATCTTCCCTATC-3' | ValC2 | 1056 bp |
 |  | 5'-CCCGTCGAC CCCACGTCTTTTTTTAATTTAAAGG-3' | pOIr |  |
RTA | (370...630)C | 5'-AATGACAGCAAACACTCGCC-3' | RTAf | 261 bp |
 |  | 5'-GCACCGTCAAATTTATTGATGG-3' | RTAr |  |
RTP | (8249–8254,1–228)C | 5'-GAGGTGTTAAAGATACAGG-3' | RTPf | 234 bp |
 |  | 5'-AATCTGAAGCTTCTTGTTCGG-3' | RTPr |  |
RTAP | (8249–8254,1–630)C | 5'-AATGACAGCAAACACTCGCC-3' | RTAf | 636 bp |
 |  | 5'-AATCTGAAGCTTCTTGTTCGG-3' | RTPr |  |