Gene ontology class | Gene name | GenBank no | chromosomal location | TGFβ-treated vs. control | IMR-treated vs. control | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
ratio | SD | p-value | FDR | ratio | SD | p-value | FDR | ||||
A | DHCR24: 24-dehydrocholesterol reductase | AA482324 | 1p33-p31.1 | 0.68↓ | (±0.20) | 0.699 | 0.733 | 1.01 | (±0.14) | 0.969 | 1.000 |
A | FDPS: farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) | T66907 T65907 | 1q22 | 0.29↓ 0.57↓ | (±0.24) (±0.45) | 0.180 0.148 | 0.291 0.272 | 1.43 1.06 | (±1.32) (±1.02) | 0.807 0.499 | 1.000 1.000 |
A | CYP1B1: cytochrome P450, family 1, subfamily B, polypeptide 1 | AA448157 | 2p21 | 0.66↓ | (±0.26) | 0.724 | 0.795 | 0.68↓ | (±0.23) | 0.716 | 1.000 |
A | CYP3A4: cytochrome P450, subfamily IIIA (niphedipine oxidase), polypeptide 4 | R91078 | 7q21.1 | 0.70↓ | (±0.05) | 0.372 | 0.479 | 0.88 | (±0.18) | 0.520 | 1.000 |
A | CYP2E: cytochrome P450, subfamily IIE (ethanol-inducible) | H50500 | 10q24.3-qter | 0.58↓ | (±0.31) | 0.509 | 0.607 | 0.96 | (±0.60) | 0.991 | 1.000 |
A | CYP19A1: cytochrome P450, family 19, subfamily A, polypeptide 1 | R32428 | 15q21.1 | 0.75↓ | (±0.08) | 0.744 | 0.812 | 1.09 | (±0.14) | 0.923 | 1.000 |
B | SDHB: succinate dehydrogenase complex, subunit B, iron sulfur (Ip) | AA463565 | 1p36.1-p35 | 0.43↓ | (±0.20) | 0.041 | 0.265 | 0.81 | (±0.38) | 0.570 | 1.000 |
B | UQCR: ubiquinol-cytochrome c reductase (6.4 kD) subunit | R46837 | 19p13.3 | 0.42↓ | (±0.40 | 0.123 | 0.265 | 0.90 | (±0.49) | 0.629 | 1.000 |
C | CDK6: cyclin-dependent kinase 6 | H73724 | 7q21-q22 | 2.57↑ | (±1.34) | 0.418 | 0.525 | 0.61↓ | (±0.34) | 0.442 | 1.000 |
D | EIF4E2: eukaryotic translation initiation factor 4E member 2 | W01534 | 2q37 | 3.54↑ | (±1.90) | 0.390 | 0.495 | 0.90 | (±0.71) | 0.499 | 1.000 |
D | TFDP2: transcription factor Dp-2 | AA465444 | 3q23 | 0.57↓ | (±0.18) | 0.036 | 0.265 | 0.97 | (±0.33) | 0.920 | 1.000 |
D | HNRPH1: heterogeneous nuclear ribonucleoprotein H1 | W96114 | 5q35.3 | 0.53↓ | (±0.24) | 0.572 | 0.665 | 0.98 | (±0.39) | 0.739 | 1.000 |
D | ZNF193: zinc finger protein 193 | AA252169 | 6p21.3 | 0.49 | (±0.20) | 0.102 | 0.265 | 0.96 | (±0.68) | 0.482 | 1.000 |
D | MYC: v-myc myelocytomatosis viral oncogene homolog (avian) | AA464600 | 8q24.12-q24.13 | 0.78 | (±0.42) | 0.156 | 0.275 | 0.91 | (±0.27) | 0.800 | 1.000 |
D | PRP18: pre-mRNA processing factor 18 | H82325 | 10p12.33 | 0.52↓ | (±0.28) | 0.086 | 0.265 | 0.97 | (±0.22) | 0.791 | 1.000 |
D | TFDP1: transcription factor Dp-1 | W33012 | 13q34 | 0.76↓ | (±0.009) | 0.858 | 0.898 | 0.99 | (±0.26) | 0.957 | 1.000 |
D | EIF2B2: eukaryotic translation initiation factor 2B, subunit 2 (beta, 39 kD) | R86304 | 14q24.3 | 0.64↓ | (±0.19) | 0.018 | 0.261 | 1.05 | (±0.25) | 0.765 | 1.000 |
D | ZNF161: zinc finger protein 161 | AA232647 | 17q23.3 | 0.71↓ 0.75↓ | (±0.11) (±0.13) | 0.339 | 0.445 | 0.94 1.08 | (±0.31) (±0.11) | 0.608 | 1.000 1.000 |
D | ZNF24: zinc finger protein 24 (KOX 17) | AA447098 | 18q12 | 0.73↓ | (±0.07) | 0.651 | 0.732 | 1.10 | (±0.46) | 0.712 | 1.000 |
D | ZNF358: Zinc finger protein 358 | H20045 | 19p13 | 0.64↓ | (±0.09) | 0.304 | 0.411 | 0.93 | (±0.30) | 0.621 | 1.000 |
D | MRPL4: mitochondrial ribosomal protein L4 | AA490981 | 19p13.2 | 0.66↓ | (±0.13) | 0.030 | 0.265 | 0.90 | (±0.16) | 0.503 | 1.000 |
D | RPS5: ribosomal protein S5 | AA456616 | 19q13.4 | 0.66↓ | (±0.13) | 0.030 | 0.265 | 0.90 | (±0.16) | 0.503 | 1.000 |
D | EZF-2: endothelial zinc finger protein 2 | R63318 | 19q13.43 | 0.58↓ | (±0.22) | 0.061 | 0.265 | 0.87 | (±0.23) | 0.374 | 1.000 |
D | ID1: inhibitor of DNA binding 1, dominant negative helix-loop-helix protein | AA457158 | 20q11 | 0.74↓ | (±0.18) | 0.210 | 0.317 | 1.06 | (±0.13) | 0.807 | 1.000 |
D | SF3A1 splicing factor 3a, subunit 1. 120 kD | T72698 | 22q12.2 | 0.71↓ | (±0.13) | 0.510 | 0.609 | 1.11 | (±0.36) | 0.967 | 1.000 |
E | CTNNBIP1: catenin, beta interacting protein 1 | R78539 | 1p36.22 | 0.59↓ | (±0.33) | 0.205 | 0.313 | 1.23 | (±0.91) | 0.836 | 1.000 |
E | CTNNB1: catenin (cadherin-associated protein), beta 1, 88 kDa | AA442092 | 3p21 | 0.65↓ | (±0.06) | 0.628 | 0.712 | 0.99 | (±0.08) | 0.948 | 1.000 |
E | WNT5A: wingless-type MMTV integration site family, member 5A | W49672 | 3p21-p14 | 0.72↓ | (±0.19) | 0.307 | 0.414 | 1.07 | (±0.16) | 0.899 | 1.000 |
E | TGFBR2: transforming growth factor, beta receptor II (70–80 kD) | AA487034 | 3p22 | 0.71↓ | (±0.17) | 0.450 | 0.555 | 1.06 | (±0.14) | 0.906 | 1.000 |
E | SIAH2: seven in absentia homolog 2 (Drosophila) | AA029041 | 3q25 | 0.65↓ | (±0.13) | 0.037 | 0.265 | 1.01 | (±0.19) | 0.948 | 1.000 |
E | PIK3R1: phosphoinositide-3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) | R54050 | 5q12-q13 | 0.61↓ | (±0.11) | 0.539 | 0.636 | 1.25 | (±0.75) | 0.832 | 1.000 |
E | PDGFRB: platelet-derived growth factor receptor, beta polypeptide | R56211 | 5q31-32 | 1.01 | (±0.29) | 0.957 | 0.973 | 1.23↑ | (±0.16) | 0.390 | 1.000 |
E | EGFR: epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) | R35665 W48713 | 7p12 | 0.47↓ 0.75↓ | (±0.04) (±0.13) | 0.022 0.444 | 0.265 0.550 | 1.02 1.09 | (±0.63) (±0.10) | 0.806 0.693 | 1.000 1.000 |
E | IGF2: insulin-like growth factor 2 (somatomedin A) | N54596 | 11p15.5 | 0.57↓ 0.63↓ | (±0.16) (±0.17) | 0.241 0.335 | 0.345 0.441 | 0.92 1.23 | (±0.27) (±0.86) | 0.565 0.912 | 1.000 1.000 |
E | SIAH1: seven in absentia homolog 1 (Drosophila) | AA447531 | 16q12 | 0.57↓ | (±0.23) | 0.055 | 0.265 | 0.97 | (±0.55) | 0.920 | 1.000 |
E | NLK: nemo-like kinase | R70769 | 17q11.2 | 0.55↓ | (±0.24) | 0.298 | 0.504 | 0.85 | (±0.39) | 0.499 | 1.000 |
E | SMAD4: SMAD, mothers against DPP homolog 4 (Drosophila) | AA456439 | 18q21.1 | 0.78↓ | (±0.14) | 0.186 | 0.296 | 1.00 | (±0.23) | 0.870 | 1.000 |
F | CTSS: cathepsin S | AA236164 | 1q21 | 0.53↓ | (±0.04) | 0.327 | 0.433 | 0.90 | (±0.30) | 0.580 | 1.000 |
F | PSMA3: proteasome (prosome, macropain) subunit, alpha type, 3 | AA465593 | 14q23 | 0.58↓ | (±0.19 | 0.319 | 0.426 | 1.11 | (±0.68) | 0.700 | 1.000 |
F | PSMB6: proteasome (prosome, macropain) subunit, beta type, 6 | AA070997 | 17p13 | 0.76↓ | (±0.16) | 0.093 | 0.265 | 1.00 | (±0.12) | 0.972 | 1.000 |
F | TGM2: transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) | R97066 | 20q12 | 0.62↓ | (±0.30) | 0.171 | 0.284 | 0.73 | (±0.24) | 0.182 | 1.000 |
H | KRT19:keratin 19 | AA464250 | 17q21.2 | 13.90 | (±16.73) | 0.390 | 0.496 | 19.95 | (±12.99) | 0.499 | 1.000 |
J | LOC440582: similar to Peptidyl-prolyl cis-trans isomerase E (PPIase E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) | W17246 | 1p34.3 | 0.79↓ | (±0.20) | 0.290 | 0.397 | 1.11 | (±0.14) | 0.293 | 1.000 |
J | RP4-622L5: hypothetical protein RP4-622L5 | T85191 | 1p36.11-p34.2 | 0.69↓ | (±0.13) | 0.066 | 0.265 | 1.11 | (±0.37) | 0.673 | 1.000 |
J | EST | T99671 | 2q36 | 0.66↓ | (±0.18) | 0.610 | 0.698 | 0.99 | (±0.30) | 0.770 | 1.000 |
J | FLJ12057 | N77990 | 3q21 | 0.71↓ | (±0.10) | 0.394 | 0.501 | 1.01 | (±0.26) | 0.840 | 1.000 |
J | MGC2198 | H81199 | 3q27-q28 | 0.57↓ | (±0.25) | 0.258 | 0.364 | 1.21 | (±0.97) | 0.727 | 1.000 |
J | EST | R74480 | 5 | 0.65↓ | (±0.09) | 0.148 | 0.272 | 0.93 | (±0.55) | 0.458 | 1.000 |
J | CCL28: chemokine (C-C motif) ligand 28 | R38459 | 5p12 | 0.63↓ | (±0.13) | 0.288 | 0.395 | 1.06 | (±0.41) | 0.905 | 1.000 |
J | FCHO2: FCH domain only 2 | H93842 | 5q13 | 1.03 | (±0.54) | 0.859 | 0.900 | 1.48↑ | (±0.44) | 0.277 | 1.000 |
J | Hypothetical gene supported by AK126569 | N92035 | 5q23 | 0.52↓ | (±0.20) | 0.161 | 0.277 | 0.94 | (±0.31) | 0.577 | 1.000 |
J | SMG1: PI-3-kinase-related kinase SMG-1 | W32907 | 6p12.3 | 0.70↓ | (±0.22) | 0.207 | 0.315 | 1.36 | (±0.55) | 0.259 | 1.000 |
J | cDNA DKFZp667D095 | R26163 | 8p22 | 0.61↓ | (±0.32) | 0.118 | 0.265 | 1.10 | (±0.59) | 0.857 | 1.000 |
J | DPYS: hypothetical protein PRO2949 | N73761 | 8q22 | 3.29↓ | (±1.73) | 0.513 | 0.611 | 0.85 | (±0.54) | 0.566 | 1.000 |
J | D12S2489E | AA397819 | 12p13.2-p12.3 | 0.66↓ | (±0.06) | 0.011 | 0.227 | 0.92 | (±0.19) | 0.678 | 1.000 |
J | ZNF629: Zinc finger protein 629 | AA128587 | 16p11.1 | 0.55↓ | (±0.15) | 0.157 | 0.275 | 0.93 | (±0.33) | 0.533 | 1.000 |
J | cDNA FLJ32121 fis, clone PEBLM1000083 | T69477 | 16q22 | 0.57↓ | (±0.18) | 0.124 | 0.265 | 0.85 | (±0.25) | 0.698 | 1.000 |
J | SFRS14: splicing factor, arginine/serine-rich 14 | AA485539 | 19p12 | 0.70↓ | (±0.17) | 0.201 | 0.310 | 1.88 | (±1.38) | 0.995 | 1.000 |
J | PNPLA4: patatin-like phospholipase domain containing 4 | AA449678 | Xp22.3 | 0.58↓ | (±0.09) | 0.387 | 0.495 | 0.94 | (±0.33) | 0.634 | 1.000 |
J | LOC286467: hypothetical protein LOC286467 | R95805 | Xq26.1 | 2.85↑ | (±1.02) | 0.293 | 0.400 | 0.85↓ | (±0.42) | 0.530 | 1.000 |