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Table 2 Inconsistent chromosome assignments between the BovGen RH map and Btau_2.0 sequence. Only the seven most significant cases are listed, involving at least three linked markers.

From: A second generation radiation hybrid map to aid the assembly of the bovine genome sequence

Case

Markers involved

Assignment Bodge RH BTA

Assignment Btau_2.0 BTA

Other assignments species, chromosome [reference]

1

BMS4030

BOVGEN_158

BOVGEN_91

1

4

BTA 1 [39]

2

MAF23

BZ855103

BZ864360

5

4

BTA 5 [40]

3

ADH7

ADH1A

ADN1C

6

21

HSA 4a [42, 42, 43]

4

PTK2B

BZ948637

B4GALT1

8

5

BTA 8 [1], MMU 15a [29], HSA 8a [30]

5

KIAA0284

Q9Y4F5

KNS2

BTBD6

11

21

HSA 14a [31]

6

BZ850749

CC517527

CC471629

14

25

-

7

ACLY

KLHL11

SC65

JUP

E0362G17

19

23

HSA 17a [44, 45]

  1. a HSA 4 is a homologue to BTA 6, MMU 15 and HSA 8 to BTA 8, HSA 14 to BTA 21 and HSA 17 to BTA 19 [15]. Most likely assignments are indicated by bold font.