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Table 1 Genotyped polymorphisms

From: Comparison of PrASE and Pyrosequencing for SNP Genotyping

Gene (alternative name) Abbreviation DbSNP number Polymorphism position (nt) PrASE amplicon lenght PrASE amplicon GC content
serpin peptidase inhibitor, clade E (plasminogen activator inhibitor type 1), member 1 SERPINE1 rs1799768 -675 (4G/5G) 48/49 0.61
nitric oxide synthase 3 NOS3 rs1799983 894 (G/T) 48 0.64
5,10-methylenetetrahydrofolate reductase MTHFR rs1801133 667 (C/T) 53 0.48
integrin, beta 3 (platelet glycoprotein IIIa) ITGB3 rs5918 196 (T/C) 49 0.62
fibrinogen beta chain FGB rs1800791 -854 (G/A) 56 0.38
coagulation factor XIII, A1 polypeptide F13A1 rs5985 163 (G/T) 46 0.69
coagulation factor VII F7 rs510317 -402 (G/A) 56 0.40
coagulation factor V F5 rs6025 1691 (G/A) 54 0.45
coagulation factor II (thrombin) F2 rs1799963 20210 (G/A) 53 0.48
matrix metallopeptidase 3 (stromelysin 1) MMP3 rs3025058 -1675 (5T/6T) 57/58 0.42