Table 2 Normalized frequencies (%) of nucleotide changes in the chimpanzee genome and the categorized genomic regions
From: Directionality of point mutation and 5-methylcytosine deamination rates in the chimpanzee genome
Category | A→G | T→C | G→A | C→T | A→C | T→G | G→T | C→A | A→T | T→A | G→C | C→G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Genome | 12.8 | 12.7 | 20.9 | 21.1 | 3.4 | 3.4 | 4.8 | 4.9 | 2.8 | 2.8 | 5.3 | 5.2 |
Intergenic regions | 12.7 | 12.6 | 20.6 | 20.7 | 3.4 | 3.4 | 5.1 | 5.1 | 2.9 | 2.9 | 5.3 | 5.3 |
Genes | 12.9 | 12.8 | 21.4 | 21.6 | 3.4 | 3.4 | 4.3 | 4.5 | 2.7 | 2.6 | 5.3 | 5.2 |
Introns | 12.8 | 12.5 | 21.2 | 21.5 | 3.5 | 3.4 | 4.4 | 4.6 | 2.7 | 2.7 | 5.6 | 5.3 |
Exons | 12.3 | 11.8 | 26.7 | 27.7 | 2.3 | 2.3 | 2.9 | 3.0 | 1.6 | 1.4 | 4.0 | 4.1 |
CpG islands | 12.1 | 12.6 | 19.6 | 19.4 | 3.8 | 4.4 | 5.0 | 5.1 | 2.7 | 2.6 | 6.3 | 6.3 |