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Table 1 Full names of in alphabetical order species used in phylogenetic studies

From: Bioinformatic analysis of an unusual gene-enzyme relationship in the arginine biosynthetic pathway among marine gamma proteobacteria: implications concerning the formation of N-acetylated intermediates in prokaryotes

Abbreviation

Complete species namea

AGRTU

Agrobacterium tumefaciens

AQUAE

Aquifex aeolicus

ARTSP

Arthrobacter species

BACCE

Bacillus cereus

BACHA

Bacillus halodurans

BACTH

Bacillus thuringiensis

CHLLI

Chlorobium limicola

CHLTE

Chlorobium tepidum

DEHET

Dehalococcoides ethenogenes

DEIGE

Deinococcus geothermalis

DEIRA

Deinococcus radiodurans

DESHA

Desulfitobacterium hafniense

DESPS

Desulfotalea psychrophila

DESVH

Desulfovibrio vulgaris

DESAC

Desulfuromonas acetoxidans

GEOKA

Geobacillus kaustophilus

GEOME

Geobacter metallireducens

GEOSL

Geobacter sulfurreducens

HALMA

Haloarcula marismortui

HELHE

Helicobacter hepaticus

KINRA

Kineococcus radiotolerans

LEIXY

Leifsonia xyli

LEPIN

Leptospira interrogans

METBU

Methanococcoides burtonii

METAC

Methanosarcina acetivorans

METBA

Methanosarcina barkeri

METMA

Methanosarcina mazei

MYCLE

Mycobacterium leprae

MYCPA

Mycobacterium paratuberculosis

MYCTU

Mycobacterium tuberculosis

NOCFA

Nocardia farcinica

ALCEU

Alcaligenes eutrophus

RHIME

Sinorhizobium meliloti

PIRBA

Pirellula baltica

SOLUS

Solibacter usitatus

STRAV

Streptomyces avermitilis

STRCO

Streptomyces coelicolor

SYMTH

Symbiobacterium thermophilum

THEFU

Thermobifida fusca

THETH

Thermus thermophilus

VIBPA

Vibrio parahaemolyticus

WOLSU

Wolinella succinogenes

  1. a Names of species used in the alignment of ArgHX sequences are listed as found in the phylogenetic tree shown on Figs. 3 and 4.