Skip to main content

Table 2 Quantitative RT-PCR primer sequences and gene names.

From: Developmental disturbances in early life stage mortality (M74) of Baltic salmon fry as studied by changes in gene expression

Gene

Name

Sequence (5'-3')

60S ribosomal protein L32

60SL32Fw

GCAGGCGGTTTAAGGGTCAG

 

60SL32Rv

AGTCTGGCATTGGGGTTGGT

Fibronectin (variant 3)

Fi Fw

GAGAACCCCCTGCACACTCA

 

Fi Rv

TCGACATGGCAGCTACACCA

Connective tissue growth factor

CTGF Fw

TTTCAACCCCCAGTACGGAAA

 

CTGF Rv

TGATTCCTTCCTTGCAACCTGA

NF-kappaB inhibitor alpha

IKBa Fw

CTCCTGAAGGCTGGCTGTGA

 

IKBa Rv

CGGCCATTACACTGCTCCTG

Deoxyribonuclease gamma

DnaseG Fw

CGTGCCAAACTCTGCCAAAC

 

DnaseG Rv

CATCCGCATCTTCCTCACCA

Thioredoxin-like protein

TrxL Fw

GGACTCGGACATTCCCAAGG

 

TrxL Rv

AGTCCATGGAGCGAGGAAGG

MEK kinase 5 (ASK-1)

ASK1 Fw

CTGCCCATTGTGGAGTCAGG

 

ASK1 Rv

AGGAGGCTGCTCAGGGTCAC

MAP kinase p38 delta

p38 Fw

TCGCCCTGCCATACTTCTCA

 

P38 Rv

GAGGACCCCCACACACACAT

MAP kinase activated protein kinase-3

MAPKAPK3 Fw

GAGGATGACCATTGGGCAGTT

 

MAPKAPK3 Rv

CAGCGGGTTGTTGGATGTGT

Guanine nucleotide exchange factor DBS

DBS Fw

TGCTGTGGGCATCACTGAGA

 

DBS Rv

TCATGCTGCTCTCCCCTCTTC

Guanine nucleotide exchange factor TIM

TIM Fw

AGGAGGTCCAGGCCATCAAA

 

TIM Rv

TCTTTGTGCAGCGACAGCAG

Aryl hydrocarbon receptor gamma

AhRg Fw

GTGGATGGGGTCACGTTCTCC

 

AhR Rv

TGGGGGTGGTCTATGGTACCATC

Cyclin D2

cycD2 Fw

GAAGAGGTTTTTCCCTTGGCAAT

 

cycD2 Rv

AACTTCTCCTCGGGCAATGG

Retinoid inducible gene 1

TIG3 Fw

AGGAAGCCCAGGCCTATGTG

 

TIG3 Rv

TGATTGGCTGCTCAGGAAGC