From: Comparison of gene coverage of mouse oligonucleotide microarray platforms
Short Name | Number of Probes | Vendor annotated | Vendor annotated (%) | ArrayGene annotated | ArrayGene annotated (%) | Genes | Gene coverage |
---|---|---|---|---|---|---|---|
Sigma | 16,377 | 11,785 | 72.0 | 13,119 | 80.1 | 12,188 | 47.95 |
Operon3 | 32,149 | 26,245 | 81.6 | 23,298 | 72.5 | 17,764 | 69.89 |
Affy | 45,102 | 40,627 | 90.1 | 38,086 | 84.4 | 19,214 | 75.6 |
ABI | 33,012* | 33,012 | 100.0 | 24,166 | 73.2 | 20,647 | 81.24 |
MEEBO | 38,524 | 35,058 | 91.0 | 33,164 | 86.1 | 22,378 | 88.05 |
Agilent | 41,174 | 34,866 | 84.7 | 33,709 | 81.9 | 20,163 | 79.33 |
Codelink | 37,797 | 30,659 | 81.1 | 29,245 | 77.4 | 19,848 | 78.09 |
Operon4 | 36,232 | 18,102 | 50.0 | 27,659 | 76.3 | 21,357 | 84.03 |
Sentrix | 46,133 | 44,399 | 96.2 | 37,895 | 82.1 | 22,993 | 90.47 |