Differential expression of selected histone modifier genes in human solid cancers

BMC Genomics

Table 2 Differential expression analysis of tumour-normal pairs using a Wilcoxon rank sum test at a 0.001 significance level.

	Breast Tum-Nor	Renal Tum-Nor	Bladder Tum-Nor	Colorectal Tum-Nor
SUV39H2	0	0	0	0
SUV39H1	0	1	0	100
SIRT1	0	1	0	100
PCAF	0	37	28	0
P300	0	0	0	0
HDAC7A	0	0	0	100
HDAC5	6	0	0	100
HDAC4	97	0	0	0
HDAC2	0	0	0	0
HDAC1	0	0	0	100
EZH2	81	100	0	0
CREBBP	100	0	0	0

Rows label target genes, columns label tissue types. Numbers in table represent a robustness measure of the differential expression between the tumour-normal pair: they equal the number of times (out of 100 bootstrapped data and expression estimate sets) that the differential expression was significant at the 0.001 level.

ISSN: 1471-2164